Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K01
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z70270-9|CAI79144.1|  261|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical ...    29   3.4  
AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical...    29   4.5  
AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical
           protein K10B4.3 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 90  GQNQHKYQSATHCLQCLPSLVFKN 19
           G++  +YQ+  HC +CLPS + K+
Sbjct: 671 GKDSQQYQTLEHCWKCLPSSITKS 694


>Z70270-9|CAI79144.1|  261|Caenorhabditis elegans Hypothetical
           protein C53D6.11 protein.
          Length = 261

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 604 VTNILINFHLLYYTTYYVKTIQNYRPLLTYYNVDHQIKIIKDG 732
           +TN L+  H L ++ Y+V   Q+YR  +   N+  + KI+K G
Sbjct: 219 ITNWLVCIHSLLHSAYFVYNHQDYREAVR--NLFRKWKIVKSG 259


>AF077544-4|ABD94098.1|  348|Caenorhabditis elegans Hypothetical
           protein H22K11.4b protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = -2

Query: 228 LDQFVNSINGIFRGASIVSIVGGLRSLALAPTWSKR--QLSFADQQGSGQNQHKY---QS 64
           + Q  NS+   FRG ++   + G+RS  + P   +   + SF      G  Q  Y    S
Sbjct: 40  ISQLENSLRNTFRGRNVNPYIAGVRSRYIIPRGKEHIFKNSFGTMVYVGTQQKFYPGTMS 99

Query: 63  ATHCLQCLP 37
             H LQ +P
Sbjct: 100 IVHNLQTMP 108


>AF077544-3|AAK39242.3|  458|Caenorhabditis elegans Hypothetical
           protein H22K11.4a protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
 Frame = -2

Query: 228 LDQFVNSINGIFRGASIVSIVGGLRSLALAPTWSKR--QLSFADQQGSGQNQHKY---QS 64
           + Q  NS+   FRG ++   + G+RS  + P   +   + SF      G  Q  Y    S
Sbjct: 150 ISQLENSLRNTFRGRNVNPYIAGVRSRYIIPRGKEHIFKNSFGTMVYVGTQQKFYPGTMS 209

Query: 63  ATHCLQCLP 37
             H LQ +P
Sbjct: 210 IVHNLQTMP 218


>AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical
           protein F07B7.14 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 504 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 641
           W +  F +LF  ++   +  H KT+Y   F F C  YF  F  +IL
Sbjct: 133 WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 174


>AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical
           protein W09B7.3 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 504 WNNYCFRELF*KISHYAFS*HLKTVYYSTFIFLCY*YFNQFSFIIL 641
           W +  F +LF  ++   +  H KT+Y   F F C  YF  F  +IL
Sbjct: 10  WQDSVFGQLFPHLNFNPYKSH-KTIY---FTFFCNFYFEMFFLLIL 51


>Z50863-2|CAA90737.1|  351|Caenorhabditis elegans Hypothetical
           protein C14H10.4 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 601 FVTNILINFHLLYYTTYYVKT-IQNYRPLLTYYNV 702
           F  + L NF ++Y TT++VK  I  Y+ ++  +++
Sbjct: 15  FCASFLTNFFVIYLTTFFVKNLIGTYKKMILIFSL 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,468
Number of Sequences: 27780
Number of extensions: 287688
Number of successful extensions: 726
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)