Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J22
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -2

Query: 239 SLYFFCISVNGG 204
           S++++C++ NGG
Sbjct: 435 SIFYYCLAYNGG 446


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
          protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 59 PYICRHLIHS 30
          PY+C H+I+S
Sbjct: 50 PYLCTHIIYS 59


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 EFEKSMKSNHEIQHENDKKQAELFKAESQD 345
           ++EK  K  HE   ++D    ++  +E+Q+
Sbjct: 275 KYEKIDKEEHESMDDDDDDDDDMSNSENQN 304


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 289 FHGLISCFSQILRSIKILYIFFAFQ 215
           +  L  C++ +L  +KIL++ +  Q
Sbjct: 40  YPSLAKCYACLLMVVKILWVIYWLQ 64


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 51   YIR*TIHQNVG*DIDAYEYNLL 116
            ++R T H N G ++  YE+  L
Sbjct: 1561 HLRVTAHNNAGFNVAEYEFATL 1582


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 533 ESFPNFRCVTRTRCRCKHRSVDV-LSPFLSASVSKFPNLNFEYSSFAASSKS 381
           +SFP+   +T      KH  V+V + P  S  ++  P +    ++  ++S +
Sbjct: 385 QSFPSLAAMTTHMKEAKHCGVNVPVPPMQSQIINPQPQITSPSNTNTSTSST 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,392
Number of Sequences: 336
Number of extensions: 2946
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)