Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J22
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 31 0.12
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 31 0.16
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 30 0.28
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.65
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.65
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 29 0.86
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces p... 28 1.5
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 28 1.5
SPAC30C2.06c |dml1||mitochondrial genome maintenance protein |Sc... 28 1.5
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.0
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 2.0
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 2.0
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 27 3.5
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 3.5
SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 26 4.6
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 26 4.6
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 26 4.6
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 4.6
SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 6.1
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 25 8.0
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 8.0
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 25 8.0
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 8.0
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 31.5 bits (68), Expect = 0.12
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +1
Query: 283 HEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE-DAANEEYSKFKFGNLETDADKKG 459
HE+ H+ K L + E +D+D + + QD + + K +LE G
Sbjct: 66 HEMTHKKTKNGVPLEQREDSTIDMDTIKILKTQDIGWIRHHRNVERAKIDHLEQQMHTVG 125
Query: 460 DKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETL-RQTAERIVKEQI 615
+ ++H + V K ++K+ P +Q + L +T R+ K+QI
Sbjct: 126 AHRNKNES-RKHTIFVDNVK---EAKSFNPAEFFQTTDDLVGRTENRVKKDQI 174
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 31.1 bits (67), Expect = 0.16
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +1
Query: 223 QKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAAN 402
+KK KE +L +E EK K+N++I +++ + A+ + + + K+ Q EDA
Sbjct: 58 EKKEKERILALE-EK--KTNYKILQKSNDETAQAMRKMQDQARLRDLQKIRQQKAEDA-- 112
Query: 403 EEYSKFKFGNLETDADKK-GDKTSTERCLQRHLVLVTQRKLGNDSKT 540
E K +E D ++ ++ + ++ + Q K N S T
Sbjct: 113 -EQRKKILAEIERDKKRRAAERENKNSSVKETAAPIKQPKNANSSST 158
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.28
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 199 VTPPLTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTA 378
++ L E+QK KE + + ++S + +QH +++ Q EL D+D T+
Sbjct: 715 ISSELIELQKDMKESYR--QLVQELRSLYNLQHTHEESQKELMYGVRNDIDALVKTCTTS 772
Query: 379 QDFEDAANEEY---SKFKFGNLETD 444
+ D +Y K KF + + D
Sbjct: 773 LNDADIILSDYISDQKSKFESKQQD 797
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.65
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 461 SPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 303
SPF S S ++ SSF +SS S+ TL ++ S ++ SA F S
Sbjct: 292 SPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATFTS 344
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -2
Query: 458 PFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 303
PF S S ++ SSF +S+ S+ TL ++ S ++ SA F S
Sbjct: 347 PFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTSITYTGTGTGSATFTS 398
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.65
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -2
Query: 461 SPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSA 315
SP S S SKF + +F S+ ASS S + A +++ DS+ SSA
Sbjct: 211 SPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTDDSSSASSA 259
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 28.7 bits (61), Expect = 0.86
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 253 VEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGN 432
V FEKS ++ E + E + K+ E+FK +D + +AV V +DF E+ + +
Sbjct: 76 VSFEKSDQNLAETKREEENKRTEVFK---KDAEHEAV--VVKRDFRPRRPEQTRPYTYDF 130
Query: 433 LETDADKK 456
L + K
Sbjct: 131 LRHQIEFK 138
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 EFEKSMKSNHEIQHENDKKQAELFKAESQDVDID-AVNKVTAQDFE 390
E EK +K+ H++ + DKK EL K D+ D K A D E
Sbjct: 148 ELEKQVKTLHDLNEQKDKKIKEL-KERINDLTYDYETLKANADDSE 192
>SPAC343.12 |rds1||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 402
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/48 (22%), Positives = 28/48 (58%)
Frame = -2
Query: 476 SVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDS 333
S V + F + S ++PN + Y + ++++++ ++L S+ +WD+
Sbjct: 256 SPPVHTNFTNGSFPQYPNGTYMYPAAVSTNRTFPLSLPGQSVELAWDA 303
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 ENDKKQAELFKAESQDVDIDAVN-KVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTST 474
+ DK E E +D D+DAV+ K +D E E+ ++ +T K+ ++T
Sbjct: 31 DQDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQTSEKKETEETPK 90
Query: 475 ERCLQR 492
E L++
Sbjct: 91 ENPLEK 96
>SPAC30C2.06c |dml1||mitochondrial genome maintenance protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 465
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -2
Query: 521 NFRCVTRTRCRCKHRSVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTS 342
+F TR +R D+ S S NLNF+ ++ SSK WA+ + ++ +
Sbjct: 301 SFTLPTRVYGSSCYRMKDIESKLQSEGRGFIHNLNFKAKNY--SSKEWALVSSASFVNVA 358
Query: 341 WDSALKSSACF 309
D + +++ F
Sbjct: 359 QDYSQQNNCLF 369
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQ-----AEL-FKAESQDVDIDAVNKV 372
L +KK K+ + + FEKS N H+ D ++ A+L + + +++ +D + K
Sbjct: 445 LLNKEKKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKS 504
Query: 373 TAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRK 519
E +N K K + +K TS ++ LQ L ++ ++
Sbjct: 505 LQGKTEGISNAIEEKQK--AMAPALEKINQLTSEKQILQVELDMLLNKE 551
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 388 EDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQ 552
E+A NE+ ++ G + DK+ DKT+ E+ +TQ + DS L Q
Sbjct: 1095 EEALNEKLARL-VGEQMVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQDQ 1148
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 388 EDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQ 552
E+A NE+ ++ G + DK+ DKT+ E+ +TQ + DS L Q
Sbjct: 1095 EEALNEKLARL-VGEQMVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQDQ 1148
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 217 EMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELF--KAESQDVDIDAVNKVTAQDFE 390
++QKK K E E M+ +E +END+++A + ESQD D + +++ E
Sbjct: 47 KVQKKNKVIESLNEMEVEMEDENE--NENDEQEAIQYYINVESQDAD-ETLHQEAQDSSE 103
Query: 391 DAANEEY 411
D ++ +
Sbjct: 104 DPFHQHF 110
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 290 ISWFDFMLFSNSTVNKNSLYFFCISVNGGVTTGNRSMQIP 171
I +F+F F+N+ N +S + + +S G+ T N Q P
Sbjct: 526 IPFFNFNSFNNNGANWSSDFNYPVSETSGLLTDNNRNQPP 565
>SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 524 PNFRCVTRTRCRCKHRSVDVLSPFLSASVSKFPNLNFE 411
P C + RC CK +D+ S S+ +++F NL E
Sbjct: 332 PLLHCPRKGRCFCKPEEIDLSSN--SSCIARFINLTNE 367
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 106 ITYYHRLLIRSISSKPAWDILTGICIERLPVVTPPLTEMQKKYKE 240
+TY HR+L + + +LT +C+ RL ++ P + +K +E
Sbjct: 546 VTYLHRILNAIKETYSGYLLLTVLCM-RLNIIKTPSFTLDEKIQE 589
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 238 LYIFFAFQLTAELRLVTVQCKYPSI 164
LYIF Q +++ L + CK+PSI
Sbjct: 723 LYIFEDMQYMSDIELHNLCCKFPSI 747
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 280 NHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEY 411
+H + +ND F+ E +D+D D ++V + +AA +Y
Sbjct: 436 DHPLDDDNDVNDLLDFETEREDID-DLTDEVMETEENEAAEADY 478
>SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 116
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 160 DILT--GICIERLPVVTPPLTEMQKKYKEFLLTVEF 261
DIL+ G CIE + + L + +K KEFL TVEF
Sbjct: 33 DILSSAGKCIEAIQL-NNSLEDFRKYSKEFLETVEF 67
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 454 KGDKTSTERCLQRHLVLVTQRKLGNDSKTL 543
KGDK S E C HL K+G + + L
Sbjct: 820 KGDKRSVEYCHYLHLAAEEALKIGANQEAL 849
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 335 SALKSSACFLSFSC*ISWFDFMLFSNSTVNKNSLYFFCISVNGGVTTGNRSMQI 174
S LK S C ++ +S+ ++ LF N + + +F+ I++N G N +
Sbjct: 432 STLKDSGC--DWNVGLSYLNW-LFVNKRITEAINFFYTITINAGTRPPNELFDV 482
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 340 QDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQ 513
Q ++ + +NK + +DA +EY+KFK E DK D T++ L+ + + Q
Sbjct: 191 QKLETEDMNKSNRKLLQDAT-DEYAKFKDKFPEAPLDK--DNLQTQKELEARIECLKQ 245
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = -2
Query: 452 LSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALKSSACFLS 303
+S SVS ++N YSS +S+ + T + +SI++S +++ S + S
Sbjct: 795 ISTSVSSQSSMNSSYSSPISSNSVTSSTSIISSIASSSYTSIPSISSIAS 844
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,574,101
Number of Sequences: 5004
Number of extensions: 49560
Number of successful extensions: 203
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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