Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J22
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0062 - 11047883-11048032,11048337-11048459,11048625-110487... 40 0.001
11_02_0120 + 8506444-8506489,8507760-8507821,8508548-8509095,850... 32 0.51
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 31 0.90
03_06_0261 + 32724726-32724738,32724836-32725278,32728132-32728137 31 1.2
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432... 30 1.6
04_02_0004 - 8430902-8431210,8431295-8431445,8431542-8431830,843... 30 1.6
03_03_0235 - 15688002-15688040,15688146-15688184,15688270-156885... 30 1.6
01_06_1378 + 36788283-36789734 30 1.6
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 30 2.1
05_07_0326 + 29274287-29274428,29274577-29275379 29 2.7
07_01_0793 - 6169661-6169936,6170942-6171025,6171473-6171590,617... 29 4.8
06_03_1336 - 29424470-29424897,29425243-29429653 29 4.8
04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680 29 4.8
12_02_0454 + 19199063-19200757,19202201-19202287 28 6.3
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526... 28 6.3
05_05_0049 - 21895172-21895181,21895297-21896717 28 6.3
04_03_0643 + 18328807-18331969,18332560-18332627 28 6.3
03_06_0406 - 33703767-33704045,33705167-33705226,33705295-337053... 28 8.4
02_05_0169 - 26428330-26429367,26429489-26429640,26429757-26430333 28 8.4
>06_02_0062 -
11047883-11048032,11048337-11048459,11048625-11048754,
11049232-11049306,11050402-11050467,11050516-11050772
Length = 266
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 439 TDADKKGDKTSTERCLQRHLVLVTQRKL--GNDSKTL--LPQGHWQEGETLRQTAERIVK 606
TDADK D+ S +R L L L+ K D K + P+ + +TLR AE +K
Sbjct: 124 TDADKTNDRKSLQRALDNRLYLLLYGKAYGAPDDKPVWHFPEKVYDNEDTLRLCAESALK 183
Query: 607 EQIGSELQIKFISNAP 654
+G F+ NAP
Sbjct: 184 SVLGGLNNTYFVGNAP 199
>11_02_0120 +
8506444-8506489,8507760-8507821,8508548-8509095,
8509381-8509537
Length = 270
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 508 TQRKLGNDSKTLLPQGHWQEGETLRQTAERIVK 606
T+ K+GN SK HW EG++L++ A I K
Sbjct: 111 TEIKVGNGSKVCFWTDHWLEGKSLQEIAPSIFK 143
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/113 (18%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +1
Query: 280 NHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKG 459
+ E +E D ++ EL++ + +++D A ++ Q+ ED N++ + E ++ G
Sbjct: 1204 DEEPDYEEDPEEVELYE-DDEEMDEAAAEELVEQN-EDNLNDKAKQ------EVTTEEDG 1255
Query: 460 DKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEG-ETLRQTAERIVKEQI 615
+K + ER + + ++ + G D ++++ + EG +++ + ++ V +++
Sbjct: 1256 NKNTEERESENNANMLEKAASGEDKQSVVEKSASVEGKQSVSEKGDKAVGKEV 1308
>03_06_0261 + 32724726-32724738,32724836-32725278,32728132-32728137
Length = 153
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 253 VEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGN 432
V ++S N E ++E+D L E DVD D + + +D ED A E KF
Sbjct: 93 VAADRSGAHNQEDENEHDMFIPSLLGGEIVDVDHDLLQNM-LRDVEDPAQNERDGMKFSR 151
Query: 433 L 435
L
Sbjct: 152 L 152
>05_05_0005 +
21442819-21442916,21443053-21443119,21443226-21443291,
21443368-21443414,21443480-21443543,21443627-21443707,
21443781-21443823,21443912-21443961,21444262-21444343,
21445045-21445120,21445451-21445558,21445782-21445833,
21445911-21446570,21446652-21448067
Length = 969
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 598 FFQQSDVVSRPPANAPEEVMSLNHFLIS 515
F +QSD S PP + P + + LN FL+S
Sbjct: 771 FKKQSDSHSGPPVDVPAQTIRLNSFLVS 798
>04_02_0004 -
8430902-8431210,8431295-8431445,8431542-8431830,
8431873-8432083,8432184-8432380,8432454-8432555,
8432666-8433998
Length = 863
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 220 MQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFED 393
++K + FL + K ++S + QH ND + E VD+D+V T +F D
Sbjct: 474 VRKSREAFLSGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTAT-NNFSD 530
>03_03_0235 -
15688002-15688040,15688146-15688184,15688270-15688558,
15688641-15688811,15688907-15689400,15690377-15690819,
15690921-15690933
Length = 495
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 262 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGN-LE 438
++S N E + E+D L E DVD + + + +D ED A E KF L+
Sbjct: 96 DRSGAHNQEDEDEHDMFIPSLLGGEMVDVDHNLLQDI-LRDVEDPAQNERDGMKFIRLLQ 154
Query: 439 TDADKKGDKTSTE 477
D D D+T +
Sbjct: 155 YDTDFGEDRTEAD 167
>01_06_1378 + 36788283-36789734
Length = 483
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = -2
Query: 524 PNFRCVTRTRCRCKHRSVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASIST 345
P+ R C+HR +SP + + + A++ WA L AS++
Sbjct: 321 PDATSTFRMAVNCRHRLRPAISPVYFGNAIQSAATTATVAELASNDLRWAAAKLNASLAA 380
Query: 344 SWDSALKSSA 315
D A++ +A
Sbjct: 381 YDDGAIRRAA 390
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 226 KKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAV 363
KK++E L + ++ S ++Q EN++KQAE++K E + + V
Sbjct: 408 KKWEESL---QNDEKQLSEQKLQIENERKQAEMYKLELESLKATVV 450
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Frame = +1
Query: 262 EKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLET 441
+K+ + E Q + D +A K + Q+ + +A K Q E+ EE +K K E
Sbjct: 130 QKAPTAKQEPQPQFD--EAPNKKKQQQEEEEEAAKKKQQQLQEE---EEATKKKQQEEEE 184
Query: 442 DAD-KKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLP-QGHWQEGETLRQTAERIVKEQ 612
+A KK K E + +H T + + T P GH + E+L + +R +E+
Sbjct: 185 EAAAKKTKKLQEEEAIAKHKPATTTERKQAEPTTAAPLPGHVVDRESLAEKVKRRAEEE 243
>07_01_0793 -
6169661-6169936,6170942-6171025,6171473-6171590,
6172917-6172987
Length = 182
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +1
Query: 460 DKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKF 639
D+TS + + LV V + S L P+G W+ ET+ + A R E+ G +
Sbjct: 35 DETSDDG--HKKLVEVLMINSQSGSGLLFPKGGWENDETVEEAAAREAIEEAGVRGDLVQ 92
Query: 640 ISNAPCGFYKYK 675
+ GFY +K
Sbjct: 93 L----LGFYDFK 100
>06_03_1336 - 29424470-29424897,29425243-29429653
Length = 1612
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 481 CLQRHLVLV---TQRKLGNDSKTLLPQGHWQEGETLRQTAERI 600
C Q+ L LV T +LGN+ L + +W +G T+R A I
Sbjct: 1480 CTQKELHLVAASTVCQLGNEQTILFREDNWLQGGTIRAIAPSI 1522
>04_03_0645 + 18351034-18353299,18353707-18354203,18354633-18354680
Length = 936
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 271 MKSNHEIQHENDKKQAELFKAESQDVDI 354
+KSN I+H D ++EL+K E ++ DI
Sbjct: 440 LKSNLSIEHWEDILRSELWKLEQEETDI 467
>12_02_0454 + 19199063-19200757,19202201-19202287
Length = 593
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 292 QHENDKKQAELFKAESQDV--DIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDK 465
+ E K AE + E DV D + +F DAA E + G D ++KGDK
Sbjct: 347 EEEEALKDAEEEEPEEVDVGFDFQPAQESEESEFSDAAEELADELSEGLEVRDEEEKGDK 406
>11_01_0650 -
5265106-5265305,5265972-5266049,5266391-5266544,
5266635-5266701,5266723-5266796,5266910-5267794
Length = 485
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 73 KMLVKTLMRMNITYYHRLL--IRSISSKPAWDILTGICIERLPVVTPPLTEMQ 225
K L++ R+N + H LL +R + + W+ + I+ LP+V+ LT +Q
Sbjct: 102 KELIEDAARLNFWFKHALLRKVRFLQLEN-WEFYDPVPIDELPLVSRHLTRLQ 153
>05_05_0049 - 21895172-21895181,21895297-21896717
Length = 476
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = -2
Query: 503 RTRCRCKHRSVDVLSPFLSASVSKFPNLNFEYSSFAASSKSWAVTLLTASISTSWDSALK 324
R C+HR +SP + + + A++ WA L A++ D A++
Sbjct: 322 RMAVNCRHRLRPAISPLYFGNAIQSVATTATVAELASNDLRWAAARLNATVVAHEDGAIR 381
Query: 323 SSA 315
+A
Sbjct: 382 RAA 384
>04_03_0643 + 18328807-18331969,18332560-18332627
Length = 1076
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 271 MKSNHEIQHENDKKQAELFKAESQDVDI 354
+KSN ++H D ++EL+K E ++ DI
Sbjct: 440 LKSNLSVEHWEDILRSELWKLEQEETDI 467
>03_06_0406 -
33703767-33704045,33705167-33705226,33705295-33705378,
33705991-33706093,33706427-33706487,33706993-33707026
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 541 LLPQGHWQEGETLRQTAERIVKEQIG 618
L P+G W+ ET+ Q A R E+ G
Sbjct: 63 LFPKGGWENDETVEQAAAREAVEEAG 88
>02_05_0169 - 26428330-26429367,26429489-26429640,26429757-26430333
Length = 588
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 265 KSMKSNHEIQHENDKKQAELFKAE-SQDVDIDAV 363
+ +K+ +Q ++DKK+AEL E S+ +D+D +
Sbjct: 240 REVKARERLQVQHDKKKAELSDQEYSRKIDVDVL 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,894
Number of Sequences: 37544
Number of extensions: 273162
Number of successful extensions: 791
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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