Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J22
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017883-1|AAH17883.1| 279|Homo sapiens mitochondrial ribosomal... 148 2e-35
AF210056-1|AAG43507.1| 279|Homo sapiens C15orf4 protein. 148 2e-35
AF205435-1|AAG33698.1| 210|Homo sapiens P2ECSL protein. 121 3e-27
AK074053-1|BAB84879.1| 118|Homo sapiens FLJ00124 protein protein. 85 3e-16
BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding prote... 35 0.33
BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing bi... 35 0.33
AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding prote... 35 0.33
AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein ... 35 0.33
BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein. 33 0.76
BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein. 33 0.76
AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein. 33 0.76
AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein. 33 0.76
AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens ... 33 0.76
AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein. 33 0.76
S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid t... 30 9.3
BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid... 30 9.3
BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid... 30 9.3
BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid... 30 9.3
BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid... 30 9.3
>BC017883-1|AAH17883.1| 279|Homo sapiens mitochondrial ribosomal
protein L46 protein.
Length = 279
Score = 148 bits (359), Expect = 2e-35
Identities = 71/183 (38%), Positives = 113/183 (61%)
Frame = +1
Query: 142 SSKPAWDILTGICIERLPVVTPPLTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAE 321
S+ W +L +C++R PVV+ PLT +Q++ L +E E+S+ S+HE++ ++ ++
Sbjct: 40 SNGSPWRLLGALCLQRPPVVSKPLTPLQEEMASLLQQIEIERSLYSDHELRALDENQRLA 99
Query: 322 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLV 501
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LV
Sbjct: 100 KKKADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLV 158
Query: 502 LVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYP 681
L+ + K G+ +LPQ WQ GETLR TAER + + ++ KF+ NAPCG Y +K+P
Sbjct: 159 LLVREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFP 218
Query: 682 XEM 690
M
Sbjct: 219 QAM 221
>AF210056-1|AAG43507.1| 279|Homo sapiens C15orf4 protein.
Length = 279
Score = 148 bits (359), Expect = 2e-35
Identities = 71/183 (38%), Positives = 113/183 (61%)
Frame = +1
Query: 142 SSKPAWDILTGICIERLPVVTPPLTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAE 321
S+ W +L +C++R PVV+ PLT +Q++ L +E E+S+ S+HE++ ++ ++
Sbjct: 40 SNGSPWRLLGALCLQRPPVVSKPLTPLQEEMASLLQQIEIERSLYSDHELRALDENQRLA 99
Query: 322 LFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLV 501
KA+ D + D + + AQD ED +++ +FK G T+AD+K D+TS R L R+LV
Sbjct: 100 KKKADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLV 158
Query: 502 LVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYP 681
L+ + K G+ +LPQ WQ GETLR TAER + + ++ KF+ NAPCG Y +K+P
Sbjct: 159 LLVREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFP 218
Query: 682 XEM 690
M
Sbjct: 219 QAM 221
>AF205435-1|AAG33698.1| 210|Homo sapiens P2ECSL protein.
Length = 210
Score = 121 bits (291), Expect = 3e-27
Identities = 59/149 (39%), Positives = 92/149 (61%)
Frame = +1
Query: 244 LLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFK 423
L +E E+S+ S+HE++ ++ ++ KA+ D + D + + AQD ED +++ +FK
Sbjct: 5 LQQIEIERSLYSDHELRALDENQRLAKKKADLHDEE-DEQDILLAQDLEDMWEQKFLQFK 63
Query: 424 FGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIV 603
G T+AD+K D+TS R L R+LVL+ + K G+ +LPQ WQ GETLR TAER +
Sbjct: 64 LGARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEWQPGETLRGTAERTL 123
Query: 604 KEQIGSELQIKFISNAPCGFYKYKYPXEM 690
+ ++ KF+ NAPCG Y +K+P M
Sbjct: 124 ATLSKNNMEAKFLGNAPCGHYTFKFPQAM 152
>AK074053-1|BAB84879.1| 118|Homo sapiens FLJ00124 protein protein.
Length = 118
Score = 84.6 bits (200), Expect = 3e-16
Identities = 43/106 (40%), Positives = 66/106 (62%)
Frame = +1
Query: 280 NHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKG 459
+HE++ ++ ++ KA+ D + D + + AQD ED +++ +FK G T+AD+K
Sbjct: 1 DHELRALDENQRLAKKKADLHDEE-DEQDILLAQDLEDMWEQKFLQFKLGARITEADEKN 59
Query: 460 DKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAER 597
D+TS R L R+LVL+ + K G+ +LPQ WQ GETLR TAER
Sbjct: 60 DRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEWQPGETLRGTAER 105
>BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 301 NDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTE 477
N+ L +++S D D+ + A++ + E K KF ++D D +T E
Sbjct: 210 NENSLGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKE 269
Query: 478 RCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPC 657
+ +Q+ L + + K P G WQE + ++ E + E +E + S A
Sbjct: 270 KSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADG 329
Query: 658 G 660
G
Sbjct: 330 G 330
>BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing
binding protein 4 protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 301 NDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTE 477
N+ L +++S D D+ + A++ + E K KF ++D D +T E
Sbjct: 210 NENSLGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKE 269
Query: 478 RCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPC 657
+ +Q+ L + + K P G WQE + ++ E + E +E + S A
Sbjct: 270 KSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADG 329
Query: 658 G 660
G
Sbjct: 330 G 330
>AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 301 NDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTE 477
N+ L +++S D D+ + A++ + E K KF ++D D +T E
Sbjct: 210 NENSLGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKE 269
Query: 478 RCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPC 657
+ +Q+ L + + K P G WQE + ++ E + E +E + S A
Sbjct: 270 KSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADG 329
Query: 658 G 660
G
Sbjct: 330 G 330
>AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein 21
protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.33
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 301 NDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGD-KTSTE 477
N+ L +++S D D+ + A++ + E K KF ++D D +T E
Sbjct: 210 NENSLGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKE 269
Query: 478 RCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPC 657
+ +Q+ L + + K P G WQE + ++ E + E +E + S A
Sbjct: 270 KSIQKQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADG 329
Query: 658 G 660
G
Sbjct: 330 G 330
>BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 425 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 484
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 485 LSLQEEFQKLEKENLE 500
>BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 425 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 484
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 485 LSLQEEFQKLEKENLE 500
>AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein.
Length = 847
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 455 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 514
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 515 LSLQEEFQKLEKENLE 530
>AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein.
Length = 545
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 153 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 212
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 213 LSLQEEFQKLEKENLE 228
>AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ40441 fis, clone TESTI2040094. ).
Length = 824
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 425 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 484
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 485 LSLQEEFQKLEKENLE 500
>AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein.
Length = 641
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 211 LTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFE 390
+TEMQ+K K +E +K++ E + + EL KA + +D+ K +
Sbjct: 289 MTEMQQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEF 348
Query: 391 DAANEEYSKFKFGNLE 438
+ EE+ K + NLE
Sbjct: 349 LSLQEEFQKLEKENLE 364
>S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid type
A receptor alpha 6 subunit protein.
Length = 453
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 634 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 509
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 634 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 509
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 634 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 509
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 634 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 509
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
>BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -3
Query: 634 LSEVQIRFAP*LFFQQSDVVSRPPANAPEEVMSLNHFLISVV 509
+S+V++ + +FF+Q+ R P E++SLN+ ++S +
Sbjct: 70 VSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKI 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,730,960
Number of Sequences: 237096
Number of extensions: 1593603
Number of successful extensions: 4380
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4376
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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