Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J19
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 27 1.9
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 3.3
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 27 3.3
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc... 27 3.3
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 26 4.3
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.7
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 25 7.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 7.5
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 7.5
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.9
SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual 25 9.9
SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyce... 25 9.9
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 641 FLPSSFLTDGWMLRCPSRNNVDISAF 564
+LPS+F D M CP+RN+ D S F
Sbjct: 79 YLPSNFQED--MSGCPNRNDTDASYF 102
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 475 LVSNYYNDLKLKLSNAQVEDEIAAIKDPKSKAEISTLLREGQRN 606
++ NY+ D+K + + + E + + + E + LL+ G+RN
Sbjct: 166 VIDNYFTDIKPRSTKEEREKIANELAHQEKQKERNKLLKSGRRN 209
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 626 FLTDGWMLRCPSRNNVDISAFDLGSLIAA 540
F+ + W L CP R V LGS + A
Sbjct: 158 FIEEHWQLLCPDREKVQTWQATLGSCLVA 186
>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 208 YKTRAGRVFAFYFV-KMESNEEYHDPDY 288
+K +G+ A + M NEE HDPDY
Sbjct: 230 WKKFSGKAGAILLIMNMSINEELHDPDY 257
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 4.3
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 217 WFCTLVTTFLQYLKSHYFSSYLSYYNVHL*I*ITDLFGGMYLQL--FLVKTIYKINQFSC 44
WF ++ ++ YF+S +S++N HL F + L + FL + + +FSC
Sbjct: 164 WFRQTNIVWMVFIAVTYFASNMSFFNPHL---AEATFADVLLTIISFLGVFLKNLRRFSC 220
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 496 DLKLKLSNAQVEDEIAAIKDPK 561
+LKL+L ++ V+DE+A I+ K
Sbjct: 530 NLKLRLQDSDVDDEVATIRSLK 551
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 279 VVIFLVTLHFNEIKSKNPTRPGFVHLLRLSYNILSHTIFLL 157
V I L T+ E+K K P F+ ++R ++H +FL+
Sbjct: 96 VQILLFTVLAIELKRKAPNAHTFLEVVRARCGPIAHGVFLV 136
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = -2
Query: 183 ILSHTIFLLILVTITFTYKFKSQIYLVGCIY 91
IL+ T + L+L++ + + +F +Q+Y+VG IY
Sbjct: 1942 ILAATSYQLVLLSGS-SAQFSTQLYIVGSIY 1971
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 156 ILVTITFTYKFKSQIYLVGCIYNYF 82
I T+ T F + +Y GCI +YF
Sbjct: 94 IYYTLDITQLFAAGVYFSGCIKDYF 118
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 349 EKIKSIIRREFQNELEARQSEVVLI 423
+++KSII+ EF N + R + + +I
Sbjct: 957 DRVKSIIKNEFSNVMPIRGARIPII 981
>SPAC1687.17c |||Der1-like |Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 217 WFCTLVTTFLQYLKSHYFSSYLSYYNVHL*I*ITDLFGGMYLQLFLVKTIY 65
WF LVT++ Y+ + +SY S+ +++ L+ L LF VK Y
Sbjct: 81 WFSLLVTSYFSYMP--FAASYFSFTMLYIWSWKHPLYRISILGLFDVKAPY 129
>SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 101 DVFTTIFSKNNLQN*PIFVFDN 36
+ T IF K+ +QN P +VF N
Sbjct: 176 ETITEIFKKSGIQNDPAYVFLN 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,513,457
Number of Sequences: 5004
Number of extensions: 48015
Number of successful extensions: 133
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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