Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J18
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    25   0.49 
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    25   0.49 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.0  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -1

Query: 698 LNGRRLCGLSRAFSFNGNRIGVPLNFPDFQ--FSGALYGLS 582
           +NG+ LC +S     +   +G  L + DFQ     ALYG++
Sbjct: 67  MNGKALCLMSLGMFLSRVPLGGKLLYKDFQLRLCAALYGVN 107


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -1

Query: 698 LNGRRLCGLSRAFSFNGNRIGVPLNFPDFQ--FSGALYGLS 582
           +NG+ LC +S     +   +G  L + DFQ     ALYG++
Sbjct: 67  MNGKALCLMSLGMFLSRVPLGGKLLYKDFQLRLCAALYGVN 107


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 184  KLQRSTPRSKPLISPKRRPTKPS 252
            K +   P  KP  S  ++PTKPS
Sbjct: 1151 KCEEKKPGHKPSTSSWQKPTKPS 1173


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 202 PRSKPLISPKRRPTKPSQSMNKTQKITTSKP 294
           P    +I+P+ + T PS +   T    ++KP
Sbjct: 411 PMQSQIINPQPQITSPSNTNTSTSSTNSNKP 441


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 366 LAISYPQLPKH-HRQPVP 316
           ++I+YPQ P+H +  P P
Sbjct: 1   MSITYPQYPQHPYAAPAP 18


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 537 PPVEEVKTVADVEASAKAVE 596
           PP+E + TV +     KAVE
Sbjct: 93  PPLESLATVEETVVRDKAVE 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,868
Number of Sequences: 336
Number of extensions: 3214
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)