Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J17
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...   127   3e-31

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score =  127 bits (307), Expect = 3e-31
 Identities = 59/72 (81%), Positives = 61/72 (84%), Gaps = 4/72 (5%)
 Frame = +3

Query: 75  DTYLTHDSPSVRKTHCTGRKHKDNVKFXYQKWMEEQAQHLIDATTAAFKAGKIAQNPF-- 248
           DTYLTHDSPSVRKTHCTGRKHKDNVKF YQKWMEEQAQHLIDATTAA+KAGKIA NPF  
Sbjct: 10  DTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAYKAGKIAPNPFTA 69

Query: 249 --GNKGTAIPPP 278
                  +IPPP
Sbjct: 70  GPPKPNISIPPP 81



 Score = 31.5 bits (68), Expect = 0.030
 Identities = 12/15 (80%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = +2

Query: 47 MPKYYCDYC-RYLPH 88
          MPKYYCDYC  YL H
Sbjct: 1  MPKYYCDYCDTYLTH 15


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,167
Number of Sequences: 2352
Number of extensions: 13237
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)