Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J15
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.4  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   4.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   4.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   4.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.6  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   9.8  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   9.8  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   9.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   9.8  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 598 NKYFHVNQNNKMIIIINDYHNNR*KGN 518
           NK  H N N K     N+Y+NN    N
Sbjct: 320 NKTIHNNNNYKYNYNNNNYNNNNYNNN 346


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 598 NKYFHVNQNNKMIIIINDYHNN 533
           NK  H N N K     N+Y+NN
Sbjct: 87  NKTIHNNNNYKYNYNNNNYNNN 108


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 598 NKYFHVNQNNKMIIIINDYHNN 533
           NK  H N N K     N+Y+NN
Sbjct: 87  NKTIHNNNNYKYNYNNNNYNNN 108


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 598 NKYFHVNQNNKMIIIINDYHNN 533
           NK  H N N K     N+Y+NN
Sbjct: 87  NKTIHNNNNYKYNYNNNNYNNN 108


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 FRHKPGRAASHACPRRTK 205
           F+H+ G  +  ACP  +K
Sbjct: 270 FKHEAGSHSCEACPAHSK 287


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 122 YNELTICVVSIPC*XQAL 69
           YN LTI ++ I C  Q L
Sbjct: 3   YNNLTIVIILIMCGVQNL 20


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 598 NKYFHVNQNNKMIIIINDYHNN 533
           N+  H N N K     N+Y+NN
Sbjct: 87  NRTIHNNNNYKYNYNNNNYNNN 108


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 189 QACDAALPGLCLNAVDLSSRSPL 121
           QA +     LCL A  ++S+SPL
Sbjct: 37  QAVNGHCSHLCLPAPRINSKSPL 59


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 189 QACDAALPGLCLNAVDLSSRSPL 121
           QA +     LCL A  ++S+SPL
Sbjct: 37  QAVNGHCSHLCLPAPRINSKSPL 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,487
Number of Sequences: 438
Number of extensions: 3380
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)