Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J14
(636 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 31 0.011
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 24 1.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 24 1.2
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 1.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 2.8
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 23 2.8
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 6.5
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 6.5
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 6.5
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.5
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 6.5
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 8.6
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 30.7 bits (66), Expect = 0.011
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Frame = +1
Query: 211 GSQLELECLIIGKPAPIVEWLKNGEPIEEYE-EATNEVILTDPESFAKIVSKLVVVAPTD 387
G+ + L+C+ G P P + W G + E + + + + + + + + D
Sbjct: 428 GNSVFLKCIASGNPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHL--NITAIHTND 485
Query: 388 GDRYTCAASA--GLKRDSATTTVY 453
G Y C AS+ G SA VY
Sbjct: 486 GGLYRCVASSKVGSADHSARINVY 509
Score = 28.7 bits (61), Expect = 0.043
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +1
Query: 190 DTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVSKLV 369
DT T + L CL +G P P++ W I+ + T++ I P+ I
Sbjct: 1314 DTFTTTYKEDVTLPCLAVGLPPPVITW-----KIKGVQFTTSDKIRQQPDGSLFIRD--- 1365
Query: 370 VVAPTDGDRYTCAASAGLKRDSAT 441
V+ + Y+C +DS T
Sbjct: 1366 -VSRNNAGEYSCHVENDYGQDSVT 1388
Score = 28.3 bits (60), Expect = 0.057
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 211 GSQLELECLIIGKPAPIVEWLKNGEPIEEYE 303
G C G P + WLK+G PI+ E
Sbjct: 342 GRPATFTCNFEGNPIKTISWLKDGHPIDHNE 372
Score = 24.6 bits (51), Expect = 0.70
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 184 PPDTVHHTTGSQLELECLIIGKPAPIVEWLKN 279
PP+ + + + +EC G P P + W+++
Sbjct: 29 PPNRIDFSNTTGAVVECSAHGNPTPDIIWVRS 60
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 211 GSQLELECLIIGKPAPIVEW 270
GS +EC G P P+V W
Sbjct: 713 GSDAAVECKADGFPRPVVTW 732
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 204 MMHGVGRRLRYMREVLQNPTLGNGRRT 124
++HG+ + Y EVL + G+G RT
Sbjct: 1163 ILHGLKKYTNYSMEVLAYTSGGDGVRT 1189
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 216 RASGMMHGVGRRLRYMREVLQNPTL 142
R G+ G +RL + EVL NP L
Sbjct: 216 RIKGISGGEKKRLSFAAEVLTNPKL 240
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 216 RASGMMHGVGRRLRYMREVLQNPTL 142
R G+ G +RL + EVL NP L
Sbjct: 216 RIKGISGGEKKRLSFAAEVLTNPKL 240
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 257 GAGFPMIRHSSSNCEPVV*CTVSG 186
G F ++ NC V+ CT SG
Sbjct: 46 GEWFRLVAGEGDNCRDVIQCTSSG 69
Score = 22.6 bits (46), Expect = 2.8
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -1
Query: 339 LRVGQDDFVSCLF--VFLYRFPVLQPFDDRRWFPYDQTFQL*LRASGMMHGVGRRLRYMR 166
LRVG ++ + + FLY + P + +PY F++ R G + R +
Sbjct: 305 LRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVW 364
Query: 165 EVLQN 151
E++ N
Sbjct: 365 EMVLN 369
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 116 LLSNFVLSIALALRPHCSETSATNTNWADI 27
L N LSI LAL +E A+ W I
Sbjct: 251 LFGNSFLSIVLALFRTAAELQASQIKWTRI 280
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 22.6 bits (46), Expect = 2.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 116 LLSNFVLSIALALRPHCSETSATNTNWADI 27
L N LSI LAL +E A+ W I
Sbjct: 269 LFGNSFLSIVLALFRTAAELQASQIKWTRI 298
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 612 VHXGLGVAEHPAGKQQVGPDVLEDRAVVQSDCGLDGL 502
+H G+G + P GP + ++SD GL L
Sbjct: 376 MHMGMGPSLTPLASPGCGPGQGGLQPTIKSDYGLTAL 412
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 223 ELECLIIGKPAPIVEWLKNGEPIEEYEE 306
EL + GK A V+W K +EE +E
Sbjct: 454 ELRGISRGKNAKDVDWQKIAGAVEEDDE 481
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 182 ACDICAKFFR 153
+CDIC K FR
Sbjct: 109 SCDICGKAFR 118
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 421 APRWPRRYTGRHQWERP 371
+PR RRYTGR + P
Sbjct: 278 SPRSQRRYTGRATCDCP 294
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -1
Query: 612 VHXGLGVAEHPAGKQQVGPDVLEDRAVVQSDCGLDGL 502
+H G+G + P GP + ++SD GL L
Sbjct: 376 MHMGMGPSLTPLASPGCGPGQGGLQPTIKSDYGLTAL 412
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 536 ARSSRTSGPTCCFPAGCSATPRP 604
A ++G CC CS+ RP
Sbjct: 180 AAGKASNGNKCCCLRTCSSAKRP 202
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.315 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,291
Number of Sequences: 336
Number of extensions: 2606
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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