Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J13
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   7.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 315  LAWDRSRSEWPKNS*SH 265
            L W++   +WP+N+  H
Sbjct: 2269 LFWNKDHCDWPENTECH 2285



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 581  RVLDHILEFLQLWD 540
            R + H+L+FL+ W+
Sbjct: 1498 RFIKHVLQFLEKWN 1511


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 301 PVPSQYGISSVTCTLSRTWEAR 366
           P+P  Y     +   SRTW AR
Sbjct: 264 PLPEAYFPKLDSLVASRTWPAR 285


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +3

Query: 18  LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 185
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +3

Query: 18  LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 185
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +3

Query: 18  LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 185
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,003
Number of Sequences: 336
Number of extensions: 2355
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)