Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J04
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   4.6  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   4.6  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   4.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   4.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   6.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -3

Query: 174 IFADCLIILIIEYXXXXKTQSAHVRTCSVFLWVFLLFLIT 55
           IFA C +  ++ Y    K    H     +  W +L+ L T
Sbjct: 14  IFAVCRLFALVPYYNFEKFSLEHQLWQKIQAWTYLILLTT 53


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 339 RLHSAERTDIYVVTSERSEPPSRRH 265
           R     R   Y   + R+EPP R+H
Sbjct: 223 REDQTRRNPYYRPRTSRTEPPRRKH 247


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 647 SKPPPTAREGGLP 685
           S P PTA  GGLP
Sbjct: 261 SAPSPTAGAGGLP 273


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 339 VKRPFVESRALIHTPVIAFRTVSGIMCE 422
           V  PF+ S    H PVI  +     +CE
Sbjct: 268 VHDPFIASLVRPHGPVIEKKPEGAFLCE 295


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 339 VKRPFVESRALIHTPVIAFRTVSGIMCE 422
           V  PF+ S    H PVI  +     +CE
Sbjct: 268 VHDPFIASLVRPHGPVIEKKPEGAFLCE 295


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 339 VKRPFVESRALIHTPVIAFRTVSGIMCE 422
           V  PF+ S    H PVI  +     +CE
Sbjct: 268 VHDPFIASLVRPHGPVIEKKPEGAFLCE 295


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 339 VKRPFVESRALIHTPVIAFRTVSGIMCE 422
           V  PF+ S    H PVI  +     +CE
Sbjct: 267 VHDPFIASLVRPHGPVIEKKPEGAFLCE 294


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 348 PFVESRALIHTPVIAFRTVSGIMCE 422
           PF+ S    H PVI  +     +CE
Sbjct: 271 PFIASLVRPHGPVIEKKPEGAFLCE 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,119
Number of Sequences: 336
Number of extensions: 3015
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)