Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_J03
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 KHTKTTHFVTLISEIPKKFDGTRIRI 167
           KH+K  HF+  +  + ++F    ++I
Sbjct: 99  KHSKIAHFLNKMIRLDERFQSVGLQI 124


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -2

Query: 229 THFVTLISEIPKKFD 185
           +++VTLI E+ K+FD
Sbjct: 155 SNYVTLIKEMRKEFD 169


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 107 LRYN*VN*IILQISSKNQISILITNDCTAFVRSQT 3
           +RY  +N +IL   S+N + ++   +  A + +QT
Sbjct: 176 MRYKELNRVILDNMSRNHLFLVRRTETLAQILNQT 210


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/31 (22%), Positives = 15/31 (48%)
 Frame = -3

Query: 339 EQFDHRCFICLLFNKLRHDPFVTQYFLNIYF 247
           + ++  C +C L ++      +T +  N YF
Sbjct: 269 DDYNRLCHLCFLLDEKLSYIILTSFLNNFYF 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,432
Number of Sequences: 336
Number of extensions: 3987
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)