Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_J02
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 251 4e-67
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 215 3e-56
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 5e-50
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 2e-49
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 4e-47
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 143 1e-34
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 104 9e-23
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18) 74 1e-13
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 65 5e-11
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 44 2e-04
SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5) 32 0.60
SB_28586| Best HMM Match : DNA_primase_lrg (HMM E-Value=3.7e-05) 30 2.4
SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 29 3.2
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 3.2
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 5.6
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017) 28 7.4
SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5) 28 7.4
SB_47074| Best HMM Match : Ion_trans (HMM E-Value=2.5e-38) 28 9.8
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 28 9.8
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 28 9.8
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 251 bits (615), Expect = 4e-67
Identities = 120/218 (55%), Positives = 147/218 (67%)
Frame = +2
Query: 131 PTLSRC*RSTLPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAE 310
P + + L VF+SLK KKTS G+ L DCI SGV NLDSG G+YA D E Y VF E
Sbjct: 633 PEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNLDSGTGVYAADEECYEVFGE 692
Query: 311 LFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCL 490
LFD IIEDYH +K + H + NLD G F+ STR+R R+L+GY P L
Sbjct: 693 LFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIRSTRIRVARNLKGYALTPGL 752
Query: 491 TESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANA 670
T + ++E KV G L+SL G+L G +YPL+GM + T+QQL+DDHFLFK+GDRFL+AA
Sbjct: 753 TRKERVDVESKVVGVLNSLTGDLAGKYYPLSGMDEATRQQLVDDHFLFKKGDRFLEAAGV 812
Query: 671 CRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
+ WP GRGI+HN +KTFLVW NEED LRIISM MG D
Sbjct: 813 NKMWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMGSD 850
Score = 174 bits (424), Expect = 6e-44
Identities = 85/177 (48%), Positives = 112/177 (63%)
Frame = +2
Query: 110 FQQAPGXPTLSRC*RSTLPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAE 289
F + P + + L +F+ LK+KKT G TL DCI SGVENLDSG GIYA D E
Sbjct: 194 FPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTLSDCINSGVENLDSGTGIYAGDEE 253
Query: 290 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG 469
SY +FA LFD IIEDYH +K KH + +LDP G F+ STR+R R+L+G
Sbjct: 254 SYKLFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEAPDLDPEGSFIRSTRIRVARNLKG 313
Query: 470 YPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKE 640
Y P L++ E+E+KV SL G+L G ++PL GM++ET+QQL++DHFLFK+
Sbjct: 314 YALTPALSKKARLEIEEKVKNVFESLTGDLAGKYHPLDGMTEETRQQLVNDHFLFKK 370
Score = 108 bits (260), Expect = 4e-24
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +2
Query: 587 MSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIIS 766
M + T+QQL+DDHFLFK+GDRFL+AA R WP GRGI+HN +KTFLVW NEED LRIIS
Sbjct: 1 MDEATRQQLVDDHFLFKKGDRFLEAAGVNREWPEGRGIFHNNDKTFLVWVNEEDQLRIIS 60
Query: 767 MXMGGD 784
M MG D
Sbjct: 61 MEMGSD 66
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +2
Query: 641 GDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM MG D
Sbjct: 451 GDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWVNEEDQLRIISMEMGSD 498
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 215 bits (526), Expect = 3e-56
Identities = 116/235 (49%), Positives = 144/235 (61%), Gaps = 27/235 (11%)
Frame = +2
Query: 161 LPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPD--------AESYSV----- 301
L +F+SLK+KKT+ G +L DCI SGV NLDS G+YA A S SV
Sbjct: 371 LTAEMFNSLKDKKTAKGISLYDCINSGVVNLDSSCGVYAGQRLECIRHIANSISVRVADV 430
Query: 302 --------------FAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVST 439
F+ LFD I+E YH +K DKH + T NLDP G F+ ST
Sbjct: 431 FYHLSTGDEESYSLFSPLFDKIVEHYHAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRST 490
Query: 440 RVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLID 619
R+R R+L+GY P LT + E+E KV+ L SL G+L G +YPLTGM + T+Q+L+D
Sbjct: 491 RIRVARNLKGYALTPGLTRKERNEIEKKVTEVLCSLTGDLAGKYYPLTGMDEATRQKLVD 550
Query: 620 DHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
DHFLFK+GDRFL+AA + WP GRGI+HN +KTFLVW NEED LRIISM G D
Sbjct: 551 DHFLFKKGDRFLEAAGVNKLWPEGRGIFHNNDKTFLVWINEEDQLRIISMEKGSD 605
Score = 119 bits (287), Expect(2) = 5e-42
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +2
Query: 554 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVW 733
+L G +YPLTGM + T++QL++DHFLFK+GDRFL AA + WP GRGI+HN KTFLVW
Sbjct: 150 DLAGKYYPLTGMDEVTREQLVNDHFLFKKGDRFLDAAGCNKEWPEGRGIFHNNEKTFLVW 209
Query: 734 CNEEDHLRIISMXMGGD 784
NEED LRIISM MG D
Sbjct: 210 VNEEDQLRIISMEMGSD 226
Score = 70.1 bits (164), Expect(2) = 5e-42
Identities = 47/116 (40%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = +2
Query: 161 LPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAP---------DAESYSVFAEL 313
L VFD LK KKT G G ++D G Y D ESY+VFA L
Sbjct: 42 LTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPL 101
Query: 314 FDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG--YP 475
FD +IEDYH+ +K D H D +LDP F+ STR+R GR L G YP
Sbjct: 102 FDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRDLAGKYYP 157
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 194 bits (474), Expect = 5e-50
Identities = 101/209 (48%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Frame = +2
Query: 173 VFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELFDPIIEDYH 340
++ L++K T G TL IQ+GV+N S VG+ A D ESY FAELFDP+IE+ H
Sbjct: 71 LYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEESYDTFAELFDPVIEERH 130
Query: 341 NGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMED 520
+GFKK+DKH G D ++V+S+RVR GRS+ G+ P T ++ +E+E
Sbjct: 131 SGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLPPHCTRAERREVER 188
Query: 521 KVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRG 697
V+ L L G+L G +YPL GMS QQQLIDDHFLF K L A R WP RG
Sbjct: 189 IVNDALDGLGGDLNGKYYPLNGMSDAQQQQLIDDHFLFDKPVSPLLTCAGMARDWPDARG 248
Query: 698 IYHNENKTFLVWCNEEDHLRIISMXMGGD 784
I+HN++K FL+W NEEDH R+ISM GGD
Sbjct: 249 IWHNDSKNFLIWVNEEDHTRVISMQQGGD 277
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 193 bits (470), Expect = 2e-49
Identities = 106/226 (46%), Positives = 134/226 (59%), Gaps = 5/226 (2%)
Frame = +2
Query: 122 PGXPTLSRC*RSTLPGXVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAE 289
P T + C L ++ LK+K T G TL IQ+GV+N S VG+ A D E
Sbjct: 395 PDLRTHNNCMARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEE 454
Query: 290 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG 469
SY VFA+LFDP+IE+ HNG+KKTDKH G+ D +V+STR R GRS+ G
Sbjct: 455 SYDVFADLFDPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRG 512
Query: 470 YPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGD 646
+ P T ++ + +E V L L G+L GT+YPL M+ E Q+QLI+DHFLF K
Sbjct: 513 FSLPPHCTRAERRSVEKVVVDALDQLGGDLSGTYYPLGKMTNEEQEQLINDHFLFDKPVS 572
Query: 647 RFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
L A R WP RGI+HN+NK FLVW NEEDH R+ISM GGD
Sbjct: 573 PLLTCAGMARDWPDARGIWHNKNKNFLVWVNEEDHTRLISMQKGGD 618
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 192 bits (468), Expect = 3e-49
Identities = 103/209 (49%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Frame = +2
Query: 173 VFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELFDPIIEDYH 340
++ SL++K T G TL D IQ+GV+N VG A D ESY VFAEL DP+IE H
Sbjct: 2331 IYRSLRDKSTKNGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEESYDVFAELLDPVIELRH 2390
Query: 341 NGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMED 520
G+KKTDKH D G LDP ++V+S+RVR GRS+ G+ P + ++ + +E
Sbjct: 2391 GGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCLPPHCSRAERRSVEK 2448
Query: 521 KVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRG 697
L+ L+GE KG +YPL M+ E Q+QLI+DHFLF K L A R WP RG
Sbjct: 2449 ISVDALAKLDGEFKGKYYPLNKMTDEEQEQLINDHFLFDKPVSPLLTCAGMARDWPDARG 2508
Query: 698 IYHNENKTFLVWCNEEDHLRIISMXMGGD 784
I+HNENK FLVW NEEDH R+ISM GGD
Sbjct: 2509 IWHNENKNFLVWVNEEDHTRVISMEKGGD 2537
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 185 bits (450), Expect = 4e-47
Identities = 99/209 (47%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Frame = +2
Query: 173 VFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELFDPIIEDYH 340
V+ L N +T G TL IQ+GV+N VG A D ESY VFA++FDP+IE H
Sbjct: 9 VYQRLSNLRTPSGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMFDPVIEKRH 68
Query: 341 NGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMED 520
+G++KTD H D +G D ++V+S RVR GRS+ G P T ++ +E+E
Sbjct: 69 DGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGLPPHCTRAERREVEK 127
Query: 521 KVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWPTGRG 697
L SL+GE KG +YPL+ M+ Q QLIDDHFLF K L A+ R WP RG
Sbjct: 128 VSVEALDSLDGEFKGKYYPLSNMTAAEQDQLIDDHFLFDKPVSPLLLASRMARDWPDARG 187
Query: 698 IYHNENKTFLVWCNEEDHLRIISMXMGGD 784
I+HN+NKTFLVW NEEDH R+ISM GG+
Sbjct: 188 IWHNDNKTFLVWVNEEDHTRVISMQKGGN 216
Score = 180 bits (439), Expect = 9e-46
Identities = 98/213 (46%), Positives = 129/213 (60%), Gaps = 5/213 (2%)
Frame = +2
Query: 161 LPGXVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELFDPII 328
L V++ L KT G TL IQ+GV+N VG A D ESY VFA++FDP+I
Sbjct: 374 LTPAVYNMLSVLKTPTGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMFDPVI 433
Query: 329 EDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYK 508
E HNG+KKT KH + + +G D ++V+S RVR GRS+ G P + ++ +
Sbjct: 434 EKRHNGYKKTAKHKT-DLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCLPPWCSRAERR 492
Query: 509 EMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFWP 685
E+E V+ L+ L+G L G +Y L M++ Q QLIDDHFLF K L A+ R WP
Sbjct: 493 EVEKIVTSALAELDGPLAGKYYSLMTMTEAEQDQLIDDHFLFDKPVSPLLLASRMARDWP 552
Query: 686 TGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
RGI+HN+NKTFLVW NEEDH R+ISM GG+
Sbjct: 553 DARGIWHNDNKTFLVWVNEEDHTRVISMQKGGN 585
Score = 172 bits (419), Expect = 2e-43
Identities = 99/229 (43%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Frame = +2
Query: 113 QQAPGXPTLSRC*RSTLPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSG----VGIYAP 280
++ PG L V++ L N KT G TL IQ+GV+N VG A
Sbjct: 755 RRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFTLDGVIQTGVDNPGHPFIFTVGCVAG 814
Query: 281 DAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRS 460
D E+Y VFA L DP+IE HNG+ K KH D + +G D FV+S RVR GRS
Sbjct: 815 DEETYKVFAALLDPVIEARHNGYLKGAKHVTDLNPD-NLVGGDDLDANFVLSCRVRTGRS 873
Query: 461 LEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLF-K 637
+ G P T ++ +E+E L++L+G LKG +YPL+ M+ Q+QLI+DHFLF K
Sbjct: 874 IRGLGLPPHCTRAERREVEKITVDALATLDGPLKGKYYPLSKMTDAEQEQLINDHFLFDK 933
Query: 638 EGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
L +A R WP RGI+HN+ K FLVW NEEDH R+ISM GG+
Sbjct: 934 PVSPLLLSARMARDWPDARGIWHNDAKNFLVWVNEEDHTRVISMQQGGN 982
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 143 bits (347), Expect = 1e-34
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 1/175 (0%)
Frame = +2
Query: 263 VGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVST 439
+G +A D ESY F + + P+I+ YH GF T KH + + D A ++ST
Sbjct: 1 MGCHAGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIIST 60
Query: 440 RVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLID 619
R+R R+L +P NP ++ E+ D ++ SL +L G Y T M+ E +Q+L+D
Sbjct: 61 RIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSLGDDLAGNLYRHTTMTDEERQKLVD 120
Query: 620 DHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMXMGGD 784
DHFLF+ D+ A+ FWP GRGI+ N+ KTFL W NE DHLRIISM MGGD
Sbjct: 121 DHFLFRGKDKMQAASGYHEFWPEGRGIFINKAKTFLNWINEGDHLRIISMEMGGD 175
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 104 bits (249), Expect = 9e-23
Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Frame = +2
Query: 224 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTL 400
D SG I D ESY F + + P+I+ YH GF T KH + +
Sbjct: 80 DTKSSGPAKWTLARAINTGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKIST 139
Query: 401 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPL 580
D A ++STR+R R+L +P NP ++ E+ D ++ SL +L G Y
Sbjct: 140 ELSDSAKAKIISTRIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSLGDDLAGNLYRH 199
Query: 581 TGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEEDHLRI 760
T M+ E +Q+L+DDHFLF+ ++ N+ KTFL W NE DHLRI
Sbjct: 200 TTMTDEERQKLVDDHFLFRS------------------RVFINKAKTFLNWINEGDHLRI 241
Query: 761 ISMXMGGD 784
ISM MGGD
Sbjct: 242 ISMEMGGD 249
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 88.2 bits (209), Expect = 7e-18
Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Frame = +2
Query: 161 LPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAP---------DAESYSVFAEL 313
L VFD LK KKT G G ++D G Y D ESY+VFA L
Sbjct: 181 LTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPL 240
Query: 314 FDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLT 493
FD +IEDYH+ +K D H D +LDP F+ STR+R GR+L+GY P LT
Sbjct: 241 FDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGYGLAPSLT 300
Query: 494 ESQYKEMEDKVSGTLSSLEGELKGT 568
+ + E+E K S T S +LK T
Sbjct: 301 KKERVELEKKASFTAKS--SQLKTT 323
>SB_26353| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.9e-18)
Length = 138
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 554 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDR-FLQAANACRFWPTGRGIYHNENKTFLV 730
E +G +Y L+ M+ + L +H L + ++ R WP GRG++H ++K+FL+
Sbjct: 2 EFEGRYYALSSMTPQDYHHLSLEHVLSDATKHPLIVSSGMSRDWPDGRGVWHTKDKSFLI 61
Query: 731 WCNEEDHLRIISMXMGGD 784
W NEEDHLR+ISM GGD
Sbjct: 62 WVNEEDHLRVISMETGGD 79
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 65.3 bits (152), Expect = 5e-11
Identities = 41/132 (31%), Positives = 67/132 (50%)
Frame = +2
Query: 389 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGT 568
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+ E
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK-EPDSE 334
Query: 569 FYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNENKTFLVWCNEED 748
+Y L +S +++ LI H +F+ Q + W +GRGI+ + + NE +
Sbjct: 335 YYKLARISSKSRDTLITKHGIFRN-----QKLDCDDTWSSGRGIWRDGTSNAIALVNERE 389
Query: 749 HLRIISMXMGGD 784
H+ ++ GGD
Sbjct: 390 HIIFLTQEFGGD 401
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 173 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDY 337
+++ K+ KT +G L D + V D+ +GI A D E Y F +LFDP+I ++
Sbjct: 80 IYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYTFIKLFDPVISNF 133
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 173 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDY 337
+++ K+ KT +G L D + V D+ +GI A D E Y F +LFDP+I ++
Sbjct: 71 IYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYTFIKLFDPVISNF 124
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 389 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEG 553
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+G
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLKG 321
>SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5)
Length = 473
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 437 TRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLI 616
T +CG G + L Y ++ D GT+ L KGT L K T ++L+
Sbjct: 32 TMRKCGTRFRGLCASVGLVSGDYAQVWDSFQGTMRELVTRFKGTMRELVTRFKGTMRELV 91
>SB_28586| Best HMM Match : DNA_primase_lrg (HMM E-Value=3.7e-05)
Length = 322
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2
Query: 363 LSVFLKPLW*SSMIGSKSSANTEYD 289
LS FL L+ S+M SKS+AN EYD
Sbjct: 82 LSDFLPHLYISNMYSSKSTANDEYD 106
>SB_15059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 558 SSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTSP 382
S+P R+ + TLSSI + + KG P RPQ + + + AGS + +P
Sbjct: 622 SAPPRVRHLDSTLSSIDNHVTRINSARKGRPL--RPQSSPAKVSFKKAGSEVEETPFNP 678
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 267 PTPESKFSTPDWMQSRRVDPNEVFLFFRLSNTXP 166
P P+ KFS P + SR +D E L F L+ P
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVSP 38
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 464 EGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDD 622
+GY ES+ EME + + +EGE++ Y +SK+ +Q L ++
Sbjct: 818 KGYQDQIRSLESRNNEMEQEYGDKMLEMEGEIEDLGYNFDQLSKKLRQDLTEN 870
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +1
Query: 472 PLQPLPHRVPVQGDGGQGLRHPV*PRGRAQGHFLPPHRHVEGDPAAAHRRPLPVQGGRPL 651
P P+P +VP G G + HP G + P + PA +P P QG P
Sbjct: 121 PYSPIPPQVPYPGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPA----QPYPQQGYPPQ 176
Query: 652 P 654
P
Sbjct: 177 P 177
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 477 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 382
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_871| Best HMM Match : 7tm_1 (HMM E-Value=0.0017)
Length = 1675
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -2
Query: 591 DMPVRG*KVPLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAG 412
D+P++ P SP+++ + P S +++ +R YP+ RPQ + N G
Sbjct: 1566 DIPLKSHNSP--SPAQVTQCPIFRPSHTIHHPPLRSRNVRYPAQVRPQYPLQASLNVKKG 1623
Query: 411 SRLP 400
+R+P
Sbjct: 1624 ARVP 1627
>SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5)
Length = 186
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 230 IQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNW-GDVDT 397
I +GV N + + E S+ F+P +DY NG++ TD H W G++ T
Sbjct: 72 IDAGVTNTTEHICVTDITYEQISI---TFEPY-QDYANGYRATDLHGKVAWVGELST 124
>SB_47074| Best HMM Match : Ion_trans (HMM E-Value=2.5e-38)
Length = 467
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 167 GXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAE 289
G VF++ + + TLL C Q V LD G Y D +
Sbjct: 47 GMVFETYEETLAQYPQTLLGCPQKRVRYLDPNSGEYCFDRD 87
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 269 IYAPDAESYSVFAELFDPIIEDYHNGFKKT-DKHPPKNWGDVDTLGNLDPAG 421
++ PDA V+ +P+++ G+ T + G T+G LD G
Sbjct: 635 VFQPDASQVEVYESCIEPLVKSCLEGYNATVFAYGQTGSGKTYTIGGLDTGG 686
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 GGQGLRHPV*PRGRAQGHFLPPHRHVEGDPAAAHRRPLPV-QGGRPLPAG 660
GG + HP+ G PP H P H P PV GG P+ G
Sbjct: 232 GGPRMDHPMGHGGPPMDRGGPPMMHGGPGPRMPHSGPEPVPPGGPPMQGG 281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,969,142
Number of Sequences: 59808
Number of extensions: 430584
Number of successful extensions: 1665
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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