Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I23
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.73 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.9  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = +3

Query: 579 WHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQ 722
           W +T  +++ A+     +  WG   ++   +   ++P+Y + L+IF Q
Sbjct: 139 WAVTIFLVLAASVIFFDVVVWGLSASDLGVFFKRFLPVYVSYLLIFVQ 186


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 711 IFFQIGWAVVQISHLAMIPSITDNLQVR 794
           ++F + WA +QI  +  +  + D +Q++
Sbjct: 267 VYFTLQWAFLQILEILALAYLCDKVQLK 294


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 254 SGKYGATDVNGTTCDIQE 307
           SG+Y   D N  TCD +E
Sbjct: 902 SGQYTTKDPNEVTCDEEE 919


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,472
Number of Sequences: 336
Number of extensions: 4738
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)