Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I23
         (824 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...    83   9e-16
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.     67   6e-11

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score = 83.4 bits (197), Expect = 9e-16
 Identities = 38/87 (43%), Positives = 49/87 (56%)
 Frame = +3

Query: 558 KYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQIGWAV 737
           +YG +KAWHL G + V  +FP +F  C GC          W   LYY   I+ FQ GWA 
Sbjct: 89  RYGPRKAWHLVGTVCVLLSFPFIFSPCLGC----GAATPEWAALLYYGPFIVIFQFGWAS 144

Query: 738 VQISHLAMIPSITDNLQVRAELTSXRY 818
            QISHL++IP +  N   + ELT+ RY
Sbjct: 145 TQISHLSLIPELVTNDHEKVELTALRY 171



 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 28/53 (52%), Positives = 36/53 (67%)
 Frame = +2

Query: 386 YGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPGCG 544
           Y +GH  NDLCA+MWF+Y+LL+  +V    +  AG +LLLGQV D L TP  G
Sbjct: 25  YAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 37/94 (39%), Positives = 51/94 (54%)
 Frame = +3

Query: 537 VVGVLADKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIF 716
           +VG  AD+  +  A + T C+L++  FP +F  C GC          W   LYY   I+ 
Sbjct: 75  LVGYEADRAASCCARYGTVCVLLS--FPFIFSPCLGC----GAATPEWAALLYYGPFIVI 128

Query: 717 FQIGWAVVQISHLAMIPSITDNLQVRAELTSXRY 818
           FQ GWA  QISHL++IP +  N   + ELT+ RY
Sbjct: 129 FQFGWASTQISHLSLIPELVTNDHEKVELTALRY 162



 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 28/53 (52%), Positives = 36/53 (67%)
 Frame = +2

Query: 386 YGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPGCG 544
           Y +GH  NDLCA+MWF+Y+LL+  +V    +  AG +LLLGQV D L TP  G
Sbjct: 25  YAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,933,920
Number of Sequences: 237096
Number of extensions: 2738385
Number of successful extensions: 5364
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5362
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)