Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_I23
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 29 3.1
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 29 3.1
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 29 3.1
AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical ... 29 3.1
U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical p... 29 5.3
Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL023810-4|CAD59138.1| 384|Caenorhabditis elegans Hypothetical ... 28 9.3
AL008881-3|CAD59164.1| 384|Caenorhabditis elegans Hypothetical ... 28 9.3
AL008881-1|CAA15517.2| 343|Caenorhabditis elegans Hypothetical ... 28 9.3
>U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical
protein F16H11.1 protein.
Length = 501
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/88 (40%), Positives = 53/88 (60%)
Frame = +3
Query: 555 DKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQIGWA 734
DK G + +WHL G +LV+ +FP++F +C+ C + W L++ I+ FQ GWA
Sbjct: 105 DKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSE----WLKVLWFVPFIMVFQFGWA 160
Query: 735 VVQISHLAMIPSITDNLQVRAELTSXRY 818
VQISHLA+IP ++ RA + S RY
Sbjct: 161 SVQISHLALIPELSSVPASRATMNSLRY 188
Score = 72.9 bits (171), Expect = 3e-13
Identities = 27/60 (45%), Positives = 45/60 (75%)
Frame = +2
Query: 371 SQNVLYGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPGCGSF 550
++ + +G+GH YNDLCA+MWF+Y +++ + VL ++ AG ++L+GQV DA++TP G F
Sbjct: 35 TKKIAFGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQVTDAISTPLVGIF 94
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 547
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 562
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 547
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 562
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 547
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 562
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 674 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSHNQ 534
Q++C F+KP TS E R R +P + V QN H +
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQHEE 562
>AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical
protein Y48G8AL.9 protein.
Length = 295
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 784 RLSVIDGIIARCEICTTAQPIWKNIIRTA*YSGIHQYKYCVFSLNQQPQHLMNSNGNVAV 605
+ S + I RCEIC P K YS H+ ++ Q +M+ + N+ +
Sbjct: 183 KTSGVSSFIRRCEICEIDLPT-KRASDAHFYSEDHETAQLMYPSKNTTQPMMSVDRNLGM 241
Query: 604 TKMHPV 587
MH +
Sbjct: 242 PNMHAI 247
>U64843-12|AAL08039.1| 492|Caenorhabditis elegans Hypothetical
protein K06C4.9 protein.
Length = 492
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 678 WWMPLYYAVLIIFFQ--IGWAVVQISHLAMIPSITDNLQVRAELTS 809
W+ LYY + IFF I +A++ ++++ +I + + + R LT+
Sbjct: 320 WYFYLYYGIRSIFFDALIPFAIISVTNIQVIQQLHKSNEERKLLTT 365
>Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical
protein E04D5.2 protein.
Length = 404
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 597 ILVTATFPLLFIRCWGCWFNENTQ--YLY--WWMPLYYAVLIIFFQIGWAVVQIS 749
+L+ T+ LLF G W+ +NT +LY + +P+++ ++ F I + ++ I+
Sbjct: 72 MLICLTYTLLFGVDAGIWYRKNTTLFFLYHRYIVPVFFIAKVVQFAIPFILILIT 126
>AL023810-4|CAD59138.1| 384|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1b protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 194 FSFFYLLLILIDECVCK*KMSGKYGATDVNGTTCDI 301
F+F Y L L C+C M+ K ++ GT D+
Sbjct: 211 FTFIYFLFCLFGTCLCCATMTSKKPSSRTTGTFADM 246
>AL008881-3|CAD59164.1| 384|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1b protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 194 FSFFYLLLILIDECVCK*KMSGKYGATDVNGTTCDI 301
F+F Y L L C+C M+ K ++ GT D+
Sbjct: 211 FTFIYFLFCLFGTCLCCATMTSKKPSSRTTGTFADM 246
>AL008881-1|CAA15517.2| 343|Caenorhabditis elegans Hypothetical
protein Y9C2UA.1a protein.
Length = 343
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 194 FSFFYLLLILIDECVCK*KMSGKYGATDVNGTTCDI 301
F+F Y L L C+C M+ K ++ GT D+
Sbjct: 170 FTFIYFLFCLFGTCLCCATMTSKKPSSRTTGTFADM 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,726,205
Number of Sequences: 27780
Number of extensions: 434758
Number of successful extensions: 1135
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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