Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I23
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   4.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 329  VDSSASYKRRWWRVSQNVLYGLGHVYNDLCAAMWF 433
            V+     ++ W +VS NV  G   V  DL  A W+
Sbjct: 1496 VEHKKKNQQEWNQVSNNVKPGGNFVVLDLVPATWY 1530


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 716 FPNWLGRGTNLTSGYDSVNHRQ 781
           F  WLG G  +++G    NHR+
Sbjct: 118 FKPWLGDGLLISTGQKWRNHRK 139


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 493 YAASRTSCRCTCNPWLWEFW 552
           Y AS T      NPW  E+W
Sbjct: 266 YMASLTPDTNRRNPWFSEYW 285


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 493 YAASRTSCRCTCNPWLWEFW 552
           Y AS T      NPW  E+W
Sbjct: 356 YMASLTPDTNRRNPWFSEYW 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,687
Number of Sequences: 438
Number of extensions: 5222
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)