Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I22
         (345 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IRD0 Cluster: CG32267-PA; n=2; Sophophora|Rep: CG3226...    34   0.56 
UniRef50_A4HEY1 Cluster: Putative uncharacterized protein; n=2; ...    32   3.0  
UniRef50_Q8ILY5 Cluster: Putative uncharacterized protein; n=2; ...    30   9.2  

>UniRef50_Q8IRD0 Cluster: CG32267-PA; n=2; Sophophora|Rep:
           CG32267-PA - Drosophila melanogaster (Fruit fly)
          Length = 49

 Score = 34.3 bits (75), Expect = 0.56
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 3   DPMEEKRQARENTINSVITFGIMCAIIRIAPLVLEH 110
           DP EE+++       + I FG + A +R+AP+VL+H
Sbjct: 10  DPAEEQKRVAAEVRFNFILFGAVIAAVRLAPIVLKH 45


>UniRef50_A4HEY1 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Leishmania braziliensis
          Length = 1535

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 167 LWNIDHVTAHCTICLLKTTMFQYQGSDSYNCTHY 66
           LW  DH+TA CT C    T+F  +    ++C H+
Sbjct: 6   LWRDDHLTAQCTACAAVFTLFHRR---RHHCRHW 36


>UniRef50_Q8ILY5 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1951

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -2

Query: 176 NSFLWNIDHVTAHCTICLLKTTMFQYQGSDSYNCTHYSKRYYAIDSVLACLTFFFHRI 3
           ++ LW I++         L  T F+Y   ++  CT+Y +  Y I      L +FFH I
Sbjct: 301 DNLLWQINNNLLKRFFIYL-ITKFKYTNKNTDLCTYYIQFIYLITLQYNVLNYFFHHI 357


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,825,882
Number of Sequences: 1657284
Number of extensions: 2887937
Number of successful extensions: 6659
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6649
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)