Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_I22
(345 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 0.38
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 1.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.2
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 22 2.0
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 2.0
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 3.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 4.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 8.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 8.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 8.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 8.2
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 24.2 bits (50), Expect = 0.38
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 250 LCKKYFFFK**HLNCFYYYCCFFV 179
LC YF L C YY+ C F+
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFI 154
Score = 24.2 bits (50), Expect = 0.38
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 250 LCKKYFFFK**HLNCFYYYCCFFV 179
LC YF+ L C YY+C F+
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFI 306
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 250 LCKKYFFFK**HLNCFYYYCCFFV 179
LC YF++ L C YY+ F+
Sbjct: 98 LCTYYFYYAFIILLCVYYFYYAFI 121
Score = 21.4 bits (43), Expect = 2.7
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3
Query: 250 LCKKYFFFK**HLNCFYYYCCFFV 179
LC YF L C YY+ F+
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFI 220
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 214 LNCFYYYCCFFVGTHSCGILIMSLHTA 134
+N Y C+ G SC ++I S+ A
Sbjct: 137 INISATYICYAFGKFSCKVMIQSVSFA 163
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 214 LNCFYYYCCFFVGTHSCGILIMSLHTA 134
+N Y C+ G SC ++I S+ A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 214 LNCFYYYCCFFVGTHSCGILIMSLHTA 134
+N Y C+ G SC ++I S+ A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 2.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 122 LKTTMFQYQGSDSYNCTHYSKRYYAI 45
LKT M + G Y C H +++ +
Sbjct: 25 LKTHMRLHTGERPYRCEHCDRQFVQV 50
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 2.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 122 LKTTMFQYQGSDSYNCTHYSKRYYAI 45
LKT M + G Y C H +++ +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.0 bits (42), Expect = 3.6
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 208 CFYYYCCFFVGTH-SCGILIM 149
C+YYY F G H + G++I+
Sbjct: 114 CYYYYA--FFGVHLAYGVVII 132
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.6 bits (41), Expect = 4.7
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = -2
Query: 182 CRNSFLWNIDH 150
C N WN DH
Sbjct: 2265 CPNGLFWNKDH 2275
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 8.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 71 HYSKRYYAIDSVLACLTFFF 12
H SK Y ++ + FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 8.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 71 HYSKRYYAIDSVLACLTFFF 12
H SK Y ++ + FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 8.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 71 HYSKRYYAIDSVLACLTFFF 12
H SK Y ++ + FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 19.8 bits (39), Expect = 8.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 71 HYSKRYYAIDSVLACLTFFF 12
H SK Y ++ + FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,667
Number of Sequences: 336
Number of extensions: 803
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 6770240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -