Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I16
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.71 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.94 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.94 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   6.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = -2

Query: 318 SLFVIRKLLKLNQTVRIRLSQFYYLYL*SFGNSSLIRP*TFAILV*TFQQAVIVLHLSQL 139
           S++  +  L +  T  I ++QFYY Y   F + +L     +  L   F Q + +L L+ L
Sbjct: 230 SIYGFQNFLFVLSTFSICITQFYYCYDSGFNSDNLTD--VYFTLQWAFLQILEILALAYL 287

Query: 138 FHTVSI*INYSK 103
              V + I   K
Sbjct: 288 CDKVQLKIGEIK 299


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 403 AVVFLIFVLKYLYELNNNHLTHDLAYLYKP 314
           A VFL+F L Y Y+    H+   ++  Y P
Sbjct: 11  AAVFLLFYLFYCYKTIKQHIYSLISLSYLP 40


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 403 AVVFLIFVLKYLYELNNNHLTHDLAYLYKP 314
           A VFL+F L Y Y+    H+   ++  Y P
Sbjct: 11  AAVFLLFYLFYCYKTIKQHIYSLISLSYLP 40


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 378 STKIKNTTA*FRVYFRYFDNFIYSVLIDN 464
           + ++KNT    ++ + ++  +  SVLIDN
Sbjct: 132 NARVKNTALWKQLRYEHYRLYQLSVLIDN 160


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/38 (23%), Positives = 15/38 (39%)
 Frame = +1

Query: 598 SFFFSRNHALYKTKMQ*HRVSHSRYRRFVSHRELSFAW 711
           +FF S  +  Y    + HR  H      ++H +    W
Sbjct: 230 TFFVSHKYTNYSAVQEMHRKGHEIAVHSITHNDDERFW 267


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 774 TKTPLNHTTGM*NGHLSSRTIPGERQFAMRHKAPI 670
           T+  L +     N +L S ++    Q    HKAPI
Sbjct: 32  TRPMLPYPQNYINSYLFSLSLAQNNQLFTHHKAPI 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,711
Number of Sequences: 336
Number of extensions: 3177
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)