Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I16
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629...    29   4.4  

>08_02_0850 +
           21862110-21862394,21862555-21862723,21862901-21862965,
           21863632-21863905,21863998-21864145,21864237-21864346,
           21864440-21864495,21864568-21864624,21864733-21864876,
           21865304-21865351
          Length = 451

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 614 ETTHYTKQKCSDIASLIVGIGALCRIANCRS 706
           +  + T  KCS +  L  G+ A C I NC S
Sbjct: 352 KVNNITIDKCSKMGLLFKGVVAACEIVNCNS 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,934,916
Number of Sequences: 37544
Number of extensions: 276444
Number of successful extensions: 495
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)