Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I16
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z81486-13|CAE47465.1|  611|Caenorhabditis elegans Hypothetical p...    28   9.1  
Z81486-12|CAC42272.1|  585|Caenorhabditis elegans Hypothetical p...    28   9.1  
AY221631-1|AAP97492.1|  611|Caenorhabditis elegans muscarinic ac...    28   9.1  
AL034391-3|CAE47471.1|  611|Caenorhabditis elegans Hypothetical ...    28   9.1  
AL034391-2|CAA22301.2|  585|Caenorhabditis elegans Hypothetical ...    28   9.1  
AF139093-1|AAD48771.1|  585|Caenorhabditis elegans muscarinic ac...    28   9.1  

>AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical
           protein Y18D10A.8 protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 7/27 (25%), Positives = 20/27 (74%)
 Frame = -3

Query: 452 NTVNEVIEITEINAKLSSSVFNLCTKI 372
           NT+N ++  ++  ++L++++F LC ++
Sbjct: 35  NTINNMVRASQFTSQLANTIFTLCAQL 61


>Z81486-13|CAE47465.1|  611|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1b protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


>Z81486-12|CAC42272.1|  585|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1a protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


>AY221631-1|AAP97492.1|  611|Caenorhabditis elegans muscarinic
           acetylcholine receptorlarge isoform protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


>AL034391-3|CAE47471.1|  611|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1b protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


>AL034391-2|CAA22301.2|  585|Caenorhabditis elegans Hypothetical
           protein Y40H4A.1a protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


>AF139093-1|AAD48771.1|  585|Caenorhabditis elegans muscarinic
           acetylcholine receptor protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 757 SYDRDVERAS*LTYHPRRTTVRDATQSAYTY 665
           S+DR       L+Y PRRTT +  T  A TY
Sbjct: 160 SFDRYFSVTRPLSYRPRRTTKKALTMIACTY 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,059,396
Number of Sequences: 27780
Number of extensions: 292694
Number of successful extensions: 571
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)