BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_I12
(719 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 138 6e-35
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 40 2e-05
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 0.72
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 24 1.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.7
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 2.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.9
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 3.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 6.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 8.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.9
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 138 bits (333), Expect = 6e-35
Identities = 70/217 (32%), Positives = 119/217 (54%)
Frame = +2
Query: 8 TRKFDYWKRKNVPYAKPVPFFGNYMRYITLQSFLGDVMQKLCQQFPDRPYFGSFYGTEPA 187
T FD+WK + V KPVPFFG I ++ ++ + +++ + P G + P
Sbjct: 23 TSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPF 82
Query: 188 LVLQNPEIIKQVFTKDFYYFNSRENRDYNHKEVFTQNLFFANGDRWKVIRQNLTPLFSSS 367
L+L +PE+IK + +DF F +R + E + +L +RW+ +R L+P+F+S
Sbjct: 83 LLLNDPELIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSG 142
Query: 368 KMKNMFYLVEKCNHSLEDMLDKETKDLQSIEIRSAMIRYTLDSICSSAFGIETNTLSEGA 547
K+K MFYL+ +C+ +LE LDK + + IE R R+T D I S AFGI+ ++++
Sbjct: 143 KLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTN-- 200
Query: 548 ENSPFPSMGSTIFSSSITRGLKLIGRSMWPGIFYKLG 658
ENS F MG +F+ + +++ + P ++ LG
Sbjct: 201 ENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLG 237
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 39.9 bits (89), Expect = 2e-05
Identities = 33/171 (19%), Positives = 68/171 (39%)
Frame = +2
Query: 35 KNVPYAKPVPFFGNYMRYITLQSFLGDVMQKLCQQFPDRPYFGSFYGTEPALVLQNPEII 214
+ +P +P GN + + + K + F D + G + + L +P +
Sbjct: 42 EKIPGPPALPLIGNALDLFGSPDAMFSQVLKKAENFKD--VVKIWVGPKLVICLIDPRDV 99
Query: 215 KQVFTKDFYYFNSRENRDYNHKEVFTQNLFFANGDRWKVIRQNLTPLFSSSKMKNMFYLV 394
+ + + + Y S E R + K L + G +W+ R+ + P F + +K+ L
Sbjct: 100 EIILSSNVYIDKSTEYRFF--KPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLF 157
Query: 395 EKCNHSLEDMLDKETKDLQSIEIRSAMIRYTLDSICSSAFGIETNTLSEGA 547
S+ + + KE + + + M T+D + +A G+ T A
Sbjct: 158 NANARSVVEKMRKENG--KEFDCHNYMSELTVDILLETAMGVSKPTRDHNA 206
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 25.0 bits (52), Expect = 0.72
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 126 SCASSSLTDRTSDRFTV---RNQP*SCRIRRSSSKFLLKTSITSTAAKTGI--TIIRKYS 290
S AS++ + T FT ++ C + + K +L +S T+T+ T TI+R +
Sbjct: 286 SSASTTCSGHTVRCFTGGPRKSHESQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHL 345
Query: 291 HRTCS 305
+ TCS
Sbjct: 346 NSTCS 350
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 55 TCAVLWELHAIYHTAELPRRCD 120
TC+ ++H HT E P CD
Sbjct: 214 TCSKQLKVHTRTHTGEKPYTCD 235
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 195 KTRAGSVP*NDPKYGLSGNCWHSFCITSPR 106
KTRA + D L G CWH+ T PR
Sbjct: 1448 KTRAQTFDGKDYPLRL-GPCWHAVMTTYPR 1476
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 335 VLPSIYLHWRRTS 297
+LPS+YL W TS
Sbjct: 254 LLPSVYLRWNLTS 266
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 700 VXQRNRQFPLEAPETKLIEYARPHR 626
+ +RN ++PL P+ + Y R R
Sbjct: 116 IIRRNSRYPLRPPQEVISHYRRTRR 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 343 VLTYYLPSISIGEEQVLCEYFLMIVIPVF--AAVEVI 239
VLT+YLPS S E+V ++I + VF VE+I
Sbjct: 263 VLTFYLPSDS--GEKVTLSISILISLHVFFLLVVEII 297
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 343 VLTYYLPSISIGEEQVLCEYFLMIVIPVF--AAVEVI 239
VLT+YLPS S E+V ++I + VF VE+I
Sbjct: 263 VLTFYLPSDS--GEKVTLSISILISLHVFFLLVVEII 297
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 22.6 bits (46), Expect = 3.8
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 295 LCEYFLMIVIPVF 257
+C++F+MI P+F
Sbjct: 92 ICDFFMMIKTPIF 104
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +2
Query: 197 QNPEIIKQVFTKDFYYFNSRENRDYNHKEVFTQNL 301
+ P+II + K + N+ N +YN+ + N+
Sbjct: 77 REPKIISSLSNKTIHNNNNYNNNNYNNYKKLYYNI 111
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 593 SITRGLKLIGRSMWPGIFYKLGLRCFQRKLT 685
SI +G +L P Y+L L C+Q++ T
Sbjct: 850 SIEKGYRLPAPMDCPEAIYQLMLDCWQKERT 880
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 411 EWLHFSTK*NIFFIFDDENSGV 346
EW +S +FIFD E +G+
Sbjct: 544 EWPSYSRDEPKYFIFDAEKTGL 565
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 197 QNPEIIKQVFTKDFYYFNSRENRDYNH 277
+ P+II + K + N+ N +YN+
Sbjct: 77 REPKIISSLSNKTIHNNNNYNNNNYNN 103
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 542 GAENSPFPSMGSTIFSS 592
G +SP PS S+ FSS
Sbjct: 86 GGSSSPSPSSPSSFFSS 102
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 197 QNPEIIKQVFTKDFYYFNSRENRDYNH 277
+ P+II + K + N+ N +YN+
Sbjct: 310 REPKIISSLSNKTIHNNNNYNNNNYNN 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,312
Number of Sequences: 438
Number of extensions: 4252
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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