Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_I06
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 235 5e-61
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 173 3e-42
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 169 5e-41
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 161 1e-38
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 152 8e-36
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 143 4e-33
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 135 8e-31
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 135 8e-31
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 134 2e-30
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 127 2e-28
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 123 4e-27
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 111 1e-23
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 104 2e-21
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 95 1e-18
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 91 3e-17
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 73 8e-12
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 46 8e-04
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.008
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.017
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.017
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.040
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.040
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.053
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.070
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.12
UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1; M... 38 0.28
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 36 0.65
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 1.5
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 34 2.6
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 34 3.5
UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 34 3.5
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 3.5
UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1; Ost... 34 3.5
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 6.1
UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putati... 33 8.0
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 235 bits (576), Expect = 5e-61
Identities = 117/191 (61%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Frame = +1
Query: 88 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 267
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 268 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 447
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 448 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLXGA 624
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ L A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 625 RSIAKLVGIRA 657
R+ A+L GIRA
Sbjct: 186 RANARLFGIRA 196
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 173 bits (421), Expect = 3e-42
Identities = 87/193 (45%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Frame = +1
Query: 82 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 261
K NN+IP+ HF K WQ +VKTWFNQPAR+ RR+ R LRP+V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 262 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 441
++Y+ KVRAG+GFTL E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAK 121
Query: 442 LILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLX 618
L++FP + ++V G++ EE ATQ++G MP+ +T D K FKAY +
Sbjct: 122 LVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIR 181
Query: 619 GARSIAKLVGIRA 657
R+ A+ G RA
Sbjct: 182 LERTNARHAGARA 194
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 169 bits (411), Expect = 5e-41
Identities = 85/189 (44%), Positives = 115/189 (60%)
Frame = +1
Query: 82 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 261
K NN++ N HF KDWQR VK WF+QP + RR+ R LRP VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPT 62
Query: 262 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 441
+RY+TK+R+GRGFT+ E++AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+AR
Sbjct: 63 LRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQAR 122
Query: 442 LILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLXG 621
L++ PK K K + + A + ++P+ R IT +EK F AY+ L
Sbjct: 123 LVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNAYETLRK 182
Query: 622 ARSIAKLVG 648
AR + G
Sbjct: 183 ARGTHRAAG 191
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 161 bits (391), Expect = 1e-38
Identities = 88/194 (45%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
Frame = +1
Query: 76 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 255
M + NNMIPNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHC 59
Query: 256 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 435
P+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY+
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYK 119
Query: 436 ARLILFPKGK-KVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQY 612
+RLI P K KVLK + + L V+ K A + E+EK F+A+
Sbjct: 120 SRLIFLPDSKNKVLKIDDGKN-----------LNVVKVVPGKVKALKVGEEEKKFEAFVT 168
Query: 613 LXGARSIAKLVGIR 654
L AR K GIR
Sbjct: 169 LRRARCDEKFAGIR 182
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 152 bits (368), Expect = 8e-36
Identities = 91/205 (44%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
Frame = +1
Query: 76 MGKGNNMIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXL 237
M KGNN IP+ H K W VK +FNQPA++ RR++ R+ L
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70
Query: 238 RPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQ 417
RP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI VD RR+NKS E + INVQ
Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQ 130
Query: 418 RIKEYRARLILFP-KGKKVLKGEANEEERKLATQLR-----GPLMPVQQPAPKSVARPIT 579
R+K Y ++L+LFP KK KG+A EEE K ATQ R + + PA + R +T
Sbjct: 131 RLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVT 189
Query: 580 EDEKNFKAYQYLXGARSIAKLVGIR 654
E+E K Y++L S + R
Sbjct: 190 EEESTKKMYKFLKKNHSAVRFFRAR 214
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 143 bits (346), Expect = 4e-33
Identities = 79/184 (42%), Positives = 112/184 (60%)
Frame = +1
Query: 103 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 282
N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69
Query: 283 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKG 462
RAGRGFTL E++A G+ P +ARTIGI+VD RR+NKS E+ NV R++EY+++L++F K
Sbjct: 70 RAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKK 129
Query: 463 KKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLXGARSIAKL 642
K + + E+ AT PV+QPAP+S R + E+ AY+ L AR+ K
Sbjct: 130 TKASEVASFEQVDVSAT------FPVEQPAPESGLRAVEVPEQT--AYRTLRLARNEKKY 181
Query: 643 VGIR 654
GIR
Sbjct: 182 KGIR 185
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 135 bits (327), Expect = 8e-31
Identities = 80/198 (40%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Frame = +1
Query: 88 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 267
NN+IPN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT R
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62
Query: 268 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 447
Y+ K R GRGFTL E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++
Sbjct: 63 YNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIV 122
Query: 448 LFP-KGKKVLKG-------EANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKA 603
L P KGKK KG A EE + L P++ IT +E+ F+A
Sbjct: 123 LQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKAFPIKAQTLAVKTHVITPEERKFRA 182
Query: 604 YQYLXGARSIAKLVGIRA 657
+ L AK G +A
Sbjct: 183 FSTLRKQFIEAKNFGKKA 200
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 135 bits (327), Expect = 8e-31
Identities = 82/198 (41%), Positives = 109/198 (55%), Gaps = 17/198 (8%)
Frame = +1
Query: 112 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 291
FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 292 RGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-- 465
RGFTL E++ AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPRKSGQ 149
Query: 466 -KVLKGEANEEERKLA-----------TQLRGPLMPVQQPAPKSVARPITEDE---KNFK 600
K L A+E A T G + P++ + + DE
Sbjct: 150 FKKLDSSADEVNAAKAAFAAEGKTEGYTTKLGAIFPIKNISAAEAVTEVKRDELPKGEEA 209
Query: 601 AYQYLXGARSIAKLVGIR 654
AY+ L RS A+ GIR
Sbjct: 210 AYRRLRETRSEARYKGIR 227
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 134 bits (323), Expect = 2e-30
Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 6/197 (3%)
Frame = +1
Query: 82 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 261
K N +PN H K W RFVKT++NQPA + RR+Q R LRP+VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 262 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 441
++Y++ + GRGF+L E++ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++
Sbjct: 61 IKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSK 120
Query: 442 LILFPK--GKK---VLKGEANEEERKLATQLRGPLMPVQQPAPK-SVARPITEDEKNFKA 603
L+L+P+ GK V+K NE Q P + Q PK A I+++ +
Sbjct: 121 LVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLTFQRTPKREKATVISKELRAKNV 180
Query: 604 YQYLXGARSIAKLVGIR 654
Y+ L AK VG++
Sbjct: 181 YRRLRQEWYNAKFVGVK 197
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 127 bits (307), Expect = 2e-28
Identities = 80/197 (40%), Positives = 106/197 (53%), Gaps = 9/197 (4%)
Frame = +1
Query: 76 MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 255
M K NNM+ + H K RFVK NQ ++ RR+ R LRP+V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59
Query: 256 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYR 435
P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD RR NK ESL +NV R+K Y
Sbjct: 60 PSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYL 119
Query: 436 ARLILFPKGKKVLKGEA-------NEEERKLA--TQLRGPLMPVQQPAPKSVARPITEDE 588
++L+LFP+ K KG A E+ R LA Q +MPV Q K R +TE +
Sbjct: 120 SKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVMPVVQEFVKEPPREVTEKD 179
Query: 589 KNFKAYQYLXGARSIAK 639
+ Y L AR AK
Sbjct: 180 TSVNVYHKLRVARKAAK 196
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 123 bits (296), Expect = 4e-27
Identities = 63/134 (47%), Positives = 80/134 (59%)
Frame = +1
Query: 70 VKMGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIV 249
++M NN IPN H K W VKT+F+ PAR RR+ R LRPIV
Sbjct: 20 LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIV 79
Query: 250 RCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKE 429
RCPTVRY+ K R GRGFT +E+ AAG +P AR GIAVD RR + ++ NV+R++
Sbjct: 80 RCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQA 139
Query: 430 YRARLILFPKGKKV 471
Y+ARLI KG+ V
Sbjct: 140 YKARLIKVKKGETV 153
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 111 bits (268), Expect = 1e-23
Identities = 55/126 (43%), Positives = 77/126 (61%)
Frame = +1
Query: 88 NNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 267
NN++PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT R
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63
Query: 268 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 447
Y+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N +R+++Y L+
Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENAERLQKYLNSLV 123
Query: 448 LFPKGK 465
+ P K
Sbjct: 124 MIPLKK 129
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 104 bits (249), Expect = 2e-21
Identities = 54/121 (44%), Positives = 70/121 (57%)
Frame = +1
Query: 112 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 291
F KDW+ V TW QP R+ RR Q R+ L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 292 RGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 471
RGF+L+E+RAA ++ ARTIGIAVDPRR+ S E L N QR+ EY RL L K+
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNAQRLTEYMNRLCLKSVSVKI 130
Query: 472 L 474
+
Sbjct: 131 V 131
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 95.1 bits (226), Expect = 1e-18
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = +1
Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 414
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 415 QRIKEYRARLILFPKGKKVLKGEANEEERK 504
+R+ E + I++PK +K + + +E +K
Sbjct: 73 ERVTETNQKDIIYPKREKEREKKGMKEGKK 102
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 90.6 bits (215), Expect = 3e-17
Identities = 57/158 (36%), Positives = 79/158 (50%)
Frame = +1
Query: 82 KGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 261
KGN+ +PN HF K + + P + R + LRPIVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 262 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRAR 441
++Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV+RIK Y +
Sbjct: 60 IKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNVERIKTYLGK 119
Query: 442 LILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 555
+ ++ K EA E K T+ +MP +P P
Sbjct: 120 ITIYESVK-----EARESGAKPYTK---EIMPFVKPKP 149
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +1
Query: 106 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 282
GHF K W+ V T FNQP + RRK + L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 283 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 393
+ GRGF+++EI+ + + A + GI++D RR+ ++
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 59.7 bits (138), Expect = 6e-08
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 97 IPNGHFHKDWQRFVKTWFNQPARRYRRK 180
+PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 88 NNMIPNGHFHKDWQRFVKTWFNQPARRYRR 177
N MI HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = +1
Query: 241 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQI 408
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 409 NVQRIKEYRARL 444
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = +1
Query: 280 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 429
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.008
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = -1
Query: 380 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 213
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.017
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 238 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 405
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +1
Query: 277 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 447
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.040
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +1
Query: 235 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 405
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 406 INVQRIKE 429
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.040
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 283 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 444
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.053
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 330
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.070
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = +1
Query: 280 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 432
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 241 PIVRCPTVRYHTKVRAGRGFTLREIR 318
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1;
Magnetococcus sp. MC-1|Rep: Serine/threonine protein
kinase - Magnetococcus sp. (strain MC-1)
Length = 1143
Score = 37.5 bits (83), Expect = 0.28
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +1
Query: 367 DPRRRNKSVESLQINVQRIKEYRAR---LILFPKGKKVLKGEANEEERKLATQLRGPLM- 534
D +R N+ + LQ N +R + + R ++L P+ +++ A ER L+
Sbjct: 733 DEKRVNRLEQRLQANKERYRTTQLRGDEMLLKPEAGEIIPNSAPPRERDEPFMASQNLIT 792
Query: 535 PVQQPAPKSVARPITEDEKNFKA 603
P PAP+S A + EDEKNF A
Sbjct: 793 PAAPPAPRS-ASFLEEDEKNFTA 814
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 36.3 bits (80), Expect = 0.65
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +1
Query: 454 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYL 615
PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQIL 348
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 414
L P++R + K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 415 QRIKEY 432
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 364 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 534
+D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200
Query: 535 PV 540
PV
Sbjct: 201 PV 202
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 33.9 bits (74), Expect = 3.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -3
Query: 327 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYSILLSAVSSSWLV 151
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 150 KP-SFNKSLPILVEMSI 103
KP SF+ + +L+ + +
Sbjct: 425 KPTSFSNVVQLLLTLKL 441
>UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3;
Bacillus|Rep: Polyketide synthase type I - Bacillus
amyloliquefaciens
Length = 1917
Score = 33.9 bits (74), Expect = 3.5
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 409 NVQRIKEYRARLILF-----PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARP 573
N +R+KEY ARL++F P+G L + + + +L LRG L V A SV
Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSV--- 951
Query: 574 ITEDEKNFKAY 606
+DE+++K +
Sbjct: 952 --DDEQDWKEF 960
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 280 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 447
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1;
Ostreococcus tauri|Rep: Predicted E3 ubiquitin ligase -
Ostreococcus tauri
Length = 355
Score = 33.9 bits (74), Expect = 3.5
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +1
Query: 259 TVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRA 438
T R + + GR L I A +N AR +G R R + +N R E
Sbjct: 247 TTRVNAIIEYGRVPDLAAI-AREVNREEARKVGAGAKARIRAITATPSSLNSSRRFEIEV 305
Query: 439 RLILFPKGKKVLKGEANEEERKLATQL-RGPLMPVQQPAPKSVARPITEDEK 591
R + P G+ + +EEE + L ++P+ Q AP+ V P +DE+
Sbjct: 306 RRVRPPAGRTMDNHHDDEEEAEEERSLSEDEILPLSQAAPRYV--PTDDDEE 355
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 420 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 292
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
>UniRef50_Q4Y1F8 Cluster: Nucleolar GTP-binding protein 1, putative;
n=6; Plasmodium|Rep: Nucleolar GTP-binding protein 1,
putative - Plasmodium chabaudi
Length = 682
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 367 DPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEAN 489
DP R+ + +S +QR K Y+ ++ + + KK KGEA+
Sbjct: 618 DPTRKMRIYQSTSTEIQRKKAYKLNIVAYRQIKKGTKGEAD 658
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,814,058
Number of Sequences: 1657284
Number of extensions: 12947809
Number of successful extensions: 34322
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 33253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34295
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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