Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I05
         (379 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   7.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   9.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   9.5  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 232 ICSHIIFTF 206
           +C+HIIF F
Sbjct: 115 LCTHIIFAF 123


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -1

Query: 232 ICSHIIFTFL 203
           +C+HII++F+
Sbjct: 52  LCTHIIYSFV 61


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 4/10 (40%), Positives = 10/10 (100%)
 Frame = -1

Query: 232 ICSHIIFTFL 203
           +C+HI+++F+
Sbjct: 50  LCTHIVYSFI 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,561
Number of Sequences: 336
Number of extensions: 904
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)