Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I05
         (379 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042...    28   2.1  
05_01_0078 - 523366-525196,525622-525675,527135-529341                 26   8.6  

>01_06_0909 -
           32903520-32903828,32903899-32903973,32904068-32904235,
           32904508-32904565,32904638-32904879,32905145-32905216,
           32905865-32905943,32906734-32907062,32907137-32907256,
           32907355-32907429,32908260-32908342,32908942-32908984,
           32909271-32909429,32910203-32910281,32910685-32910755,
           32910847-32910946,32911023-32911229,32911348-32911442,
           32912362-32912436,32912621-32912713,32913078-32913182,
           32913851-32913921,32914943-32915096,32916035-32916098,
           32916717-32916800,32917543-32917589,32918352-32918411,
           32918521-32918592
          Length = 1062

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -2

Query: 165 FKISFEPSTCNIAPSFSPNTGAACCXSKIFSXXLGXXRSFMCFIFNWNSWKHXKK 1
           + +   P+   IA +     G A C   +    LG  RS++C +  W+  K   K
Sbjct: 253 YPVLLTPTEKQIARNICQAFGQAVCGFDLLRCDLGEARSYVCDVNGWSFVKSSHK 307


>05_01_0078 - 523366-525196,525622-525675,527135-529341
          Length = 1363

 Score = 26.2 bits (55), Expect = 8.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 1   FFLVLPGVPVENEAHKGAXXAQXXAEYLGXATCSSSVRTER 123
           F ++   VP +NEA K         E L    C  + RTER
Sbjct: 622 FDMIDANVPRDNEARKMIEGGLFGQEALNIIACEGAERTER 662


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,621,115
Number of Sequences: 37544
Number of extensions: 84662
Number of successful extensions: 178
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)