Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I04
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 537 TGSGLGSRLSQPRNDGRRNR*AF 605
           +G GLG+ L Q + DG R   AF
Sbjct: 608 SGYGLGAELYQIQEDGSRGVIAF 630


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 218 IRMYFPCARFKDFYTYARQPVWRLYG 295
           I  Y  C  +  F TYA +  + L+G
Sbjct: 198 ITWYQQCVTYNVFPTYAHELTYLLFG 223


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 218 IRMYFPCARFKDFYTYARQPVWRLYG 295
           I  Y  C  +  F TYA +  + L+G
Sbjct: 198 ITWYQQCVTYNVFPTYAHELTYLLFG 223


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 416 ATIKTCARRLIHSFGG 463
           AT K  A+RLI  F G
Sbjct: 238 ATAKIAAKRLIEDFSG 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,196
Number of Sequences: 336
Number of extensions: 4284
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)