Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_I04
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical pr...   138   4e-33
Z81137-5|CAB03463.1|   86|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z81534-2|CAB04344.2|  226|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical
           protein K09E4.4 protein.
          Length = 715

 Score =  138 bits (334), Expect = 4e-33
 Identities = 62/172 (36%), Positives = 87/172 (50%)
 Frame = +1

Query: 262 IRATTGVAALWGFNYYLKKYCKSQIAWQVQRXXXXXXXXXXXXXXXSNDRFRYYQNVCTA 441
           + A T   AL   N YL+  C SQ++W                    + + RY+ N+CT 
Sbjct: 85  VTANTPTDALNAINTYLRTECLSQVSWSNSSFSSGCRKRTSDFINFESKQIRYFGNMCTF 144

Query: 442 SYSFVWWQTNDWVEHVQWMALNGINLALAPVAQEAAWARVYRSLGMTDDEIDEHFTGPAF 621
           SYSF WW+   W   + W+ALNG N  L P+ QE  W  ++  LG+  DE+D +FT  A+
Sbjct: 145 SYSFAWWEWPQWERFIDWIALNGFNTVLMPLGQEIIWRDIFMGLGVQRDELDSYFTSQAY 204

Query: 622 LAWLRMGNVHGWGGPLLKSWNDKQREIQDSVIDYMYXLGIVSVFPAFNGHVP 777
           LAW RMGN+  +GG L  +       +   +ID +  LGI  + P F G VP
Sbjct: 205 LAWHRMGNLKAYGGGLSDAQMLNDHNLAKRIIDRLLELGITPILPTFAGFVP 256


>Z81137-5|CAB03463.1|   86|Caenorhabditis elegans Hypothetical
           protein W02D9.6 protein.
          Length = 86

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 538 QEAAWARVYRSLGMTDDEIDEHFTGP 615
           +EA W  +Y + G  DDEI + F GP
Sbjct: 30  EEAYWPELYTTRGPEDDEIYQPFIGP 55


>U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical
           protein C31H2.1b protein.
          Length = 639

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 487 VQWMALNGINLALAPVAQEAAWARVYRSLGMTDDEI 594
           VQW A +   LAL    + AA+  + R LG TDD +
Sbjct: 282 VQWAASSHTILALVKKHKSAAYVLLKRRLGTTDDSV 317


>U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical
           protein C31H2.1a protein.
          Length = 696

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 487 VQWMALNGINLALAPVAQEAAWARVYRSLGMTDDEI 594
           VQW A +   LAL    + AA+  + R LG TDD +
Sbjct: 339 VQWAASSHTILALVKKHKSAAYVLLKRRLGTTDDSV 374


>Z79756-6|CAB02117.3|  693|Caenorhabditis elegans Hypothetical
           protein F53C11.2 protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 619 FLAWLRMGNVHGWGGPL 669
           F++W+ + N +GWGGP+
Sbjct: 571 FVSWVIIANHYGWGGPI 587


>Z81534-2|CAB04344.2|  226|Caenorhabditis elegans Hypothetical
           protein F37H8.3 protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 550 WARVYRSLGMTDDEIDEHFTGPAFLAWL 633
           W  + RSLG+ DD +     G  F  WL
Sbjct: 28  WVAMSRSLGLPDDAVHSESVGIEFSQWL 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,769,069
Number of Sequences: 27780
Number of extensions: 402000
Number of successful extensions: 907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)