Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H23
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z71262-9|CAA95817.2|  440|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U97003-2|AAB52271.2|  376|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AY037797-1|AAK94762.1|  412|Caenorhabditis elegans GLY-18 protein.     29   3.6  
Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical protein
            C54D10.7 protein.
          Length = 1144

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +1

Query: 355  RPSQDKGATSKACWRE-QMNILCKAANDLVEVIFSNSLNIYKNNDKLESRPKILAGTPLA 531
            R  Q++    K  W +  M I  K  ND++E  ++N LN+ ++ +K  +       T ++
Sbjct: 932  RQHQERADKMKQQWEQIMMMIKHKMWNDIIERNWTNRLNVLRSANKKVAELFNRFFTEIS 991

Query: 532  EALSYITKTTNLGTNEHRMAILTNRLRN 615
                 I K+ ++     R++I+ N L N
Sbjct: 992  IIQREIEKSEDISMERKRVSIVLNTLTN 1019


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 316  INSAKCAHILQQVRPSQDKGATSKACW 396
            +N+AK    +Q+ +   D G TSK CW
Sbjct: 1030 LNTAKVEKCIQECKTDSDCGQTSKCCW 1056


>Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical
           protein R06A4.2 protein.
          Length = 837

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 82  SQILEK-LKNVDPNDVDAVKEALSTFFQNISNWT 180
           SQ++++ L + D  D++ + EAL   F N  NWT
Sbjct: 734 SQVVQQVLDDADDKDLELIHEALEKAFGNQENWT 767


>Z71262-9|CAA95817.2|  440|Caenorhabditis elegans Hypothetical
           protein F22D6.11 protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +1

Query: 400 EQMNILCKAANDLVEVIFSNSLNIYKNNDKLESRPKILAGTPLAEALSYIT 552
           ++ +IL K  NDL++ +  N LNI+ N  K  ++ +I+    + + L Y T
Sbjct: 44  QETSILSKIENDLLDDLDINCLNIF-NGSKNRNQLRIVNSRSIEDKLLYST 93


>U97003-2|AAB52271.2|  376|Caenorhabditis elegans Hypothetical
           protein F47C10.1 protein.
          Length = 376

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 198 MVECFRE--RIAPVSKILFYTSYNNRRLFSEI 287
           + +CF +   ++ V K+ +  SYNN++LF++I
Sbjct: 342 LAQCFEDVQHLSTVLKLFYPDSYNNKKLFADI 373


>AY037797-1|AAK94762.1|  412|Caenorhabditis elegans GLY-18 protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +1

Query: 400 EQMNILCKAANDLVEVIFSNSLNIYKNNDKLESRPKILAGTPLAEALSYIT 552
           ++ +IL K  NDL++ +  N LNI+ N  K  ++ +I+    + + L Y T
Sbjct: 16  QETSILSKIENDLLDDLDINCLNIF-NGSKNRNQLRIVNSRSIEDKLLYST 65


>Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical
           protein D1025.2 protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +1

Query: 421 KAANDLVEVIFSNSLNIYKNNDKLESRPKILAGTPLAEALSYITKTTNLGTNEHRMAILT 600
           KAA+D+   +   S  I + N KLE  P I+  +PL +   Y  + T   +NE    +LT
Sbjct: 80  KAASDIYAPV---SGKILEKNTKLEDEPGIINKSPLEKGWLYRLEIT---SNEQLNELLT 133

Query: 601 NRLRNVF 621
               N F
Sbjct: 134 EEQYNKF 140


>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical protein
            C56E6.6 protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
 Frame = +1

Query: 82   SQILEKLKNVDPNDVDAVKEALSTF--FQNISNWTLVDNTRWLNALENVLRRFPKFCSTH 255
            S+I + L  +    +      L+TF  FQ+     +  +   L++LE  L+  P  C   
Sbjct: 956  SRIFDTLTGISILSLSLTDNKLTTFNPFQSTVAPAVNQHGTILHSLE--LKNNPIKCDCQ 1013

Query: 256  RTTTEDYL--VKFLDSHNHSSVINSAKCAHILQQVRPSQDKGATSKACWREQMNILCKAA 429
                +D++   KFL  H+ S   +  +CA        S    A     ++ +M +L K+ 
Sbjct: 1014 FKWMDDFIRVTKFLSDHHISHDFDKVECADAQSSNLESFASAANELFSYKTKMTLLSKSE 1073

Query: 430  NDLVE--VIFSNSL 465
            +  +E  V +SN L
Sbjct: 1074 DFGLECAVKYSNPL 1087


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,548,163
Number of Sequences: 27780
Number of extensions: 319924
Number of successful extensions: 857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)