Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_H22
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome, ma... 194 3e-49
BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome, ma... 194 3e-49
BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome, ma... 194 3e-49
BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome, ma... 194 3e-49
CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein. 192 2e-48
U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen pr... 182 2e-45
CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein. 127 4e-29
U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein. 127 5e-29
L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein. 127 5e-29
CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein. 127 5e-29
BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome, ma... 127 5e-29
BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome, ma... 127 5e-29
BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome, ma... 127 5e-29
AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA... 127 5e-29
D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA2... 108 2e-23
CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein. 108 2e-23
CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein. 108 2e-23
BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome, ma... 108 2e-23
BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome, ma... 108 2e-23
BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome, ma... 108 2e-23
AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing... 108 2e-23
AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA... 108 2e-23
U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen pr... 51 6e-06
AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein. 31 4.9
AB007137-1|BAA28836.1| 76|Homo sapiens PA28 alpha subunit prot... 31 4.9
>BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 194 bits (473), Expect = 3e-49
Identities = 88/192 (45%), Positives = 135/192 (70%), Gaps = 5/192 (2%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIV 772
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ DQISRY+I+RAK+V
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 773 SXVAKYPHIDDY 808
S +AKYPH++DY
Sbjct: 191 SKIAKYPHVEDY 202
>BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 194 bits (473), Expect = 3e-49
Identities = 88/192 (45%), Positives = 135/192 (70%), Gaps = 5/192 (2%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIV 772
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ DQISRY+I+RAK+V
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 773 SXVAKYPHIDDY 808
S +AKYPH++DY
Sbjct: 191 SKIAKYPHVEDY 202
>BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 194 bits (473), Expect = 3e-49
Identities = 88/192 (45%), Positives = 135/192 (70%), Gaps = 5/192 (2%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIV 772
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ DQISRY+I+RAK+V
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 773 SXVAKYPHIDDY 808
S +AKYPH++DY
Sbjct: 191 SKIAKYPHVEDY 202
>BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 194 bits (473), Expect = 3e-49
Identities = 88/192 (45%), Positives = 135/192 (70%), Gaps = 5/192 (2%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIV 772
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ DQISRY+I+RAK+V
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 773 SXVAKYPHIDDY 808
S +AKYPH++DY
Sbjct: 191 SKIAKYPHVEDY 202
>CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein.
Length = 254
Score = 192 bits (467), Expect = 2e-48
Identities = 87/192 (45%), Positives = 134/192 (69%), Gaps = 5/192 (2%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + +AE + FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSEAEDWVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIV 772
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ DQISRY+I+RAK+V
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 773 SXVAKYPHIDDY 808
S +AKYPH++DY
Sbjct: 191 SKIAKYPHVEDY 202
>U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen
protein.
Length = 267
Score = 182 bits (442), Expect = 2e-45
Identities = 89/205 (43%), Positives = 135/205 (65%), Gaps = 18/205 (8%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ + KAE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +N
Sbjct: 15 VDSFRERITSKAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 428 NE-----PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELV 592
+ P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+
Sbjct: 75 SHDGLDGPTYKKRRLDECE----EAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 593 EDSNL-------------LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFD 733
E N +KMW+ +IP+IEDGNNFGVSIQE+T+AE+++VESEAA++ D
Sbjct: 131 EKCNTPSGKGPHICFDLQVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLD 190
Query: 734 QISRYFISRAKIVSXVAKYPHIDDY 808
QISRY+I+RAK+VS +AKYPH++DY
Sbjct: 191 QISRYYITRAKLVSKIAKYPHVEDY 215
>CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 127 bits (307), Expect = 4e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHSQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA28
alpha protein.
Length = 249
Score = 127 bits (306), Expect = 5e-29
Identities = 64/187 (34%), Positives = 100/187 (53%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 14 VDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKE 73
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
E K+Q + + E P G V CN+ + L+ +KP I++++E NL
Sbjct: 74 KEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNL 130
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ W+ IP+IEDGNNFGV++QE + S+ ++ F QIS+YF R V+ AK
Sbjct: 131 VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAK 190
Query: 788 YPHIDDY 808
PH+ DY
Sbjct: 191 QPHVGDY 197
>D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA28
suunit beta protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVHKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing
protein 22 protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA28
beta protein.
Length = 239
Score = 108 bits (260), Expect = 2e-23
Identities = 61/187 (32%), Positives = 101/187 (54%)
Frame = +2
Query: 248 VQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSN 427
V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP +
Sbjct: 17 VEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDD 76
Query: 428 NEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL 607
K+++ + + G +P N+ + L+ LVKP + L E L
Sbjct: 77 EMETDKQEKKEVPKC----------------GFLPGNEKVLSLLALVKPEVWTLKEKCIL 120
Query: 608 LKMWISFMIPKIEDGNNFGVSIQEDTLAEIQSVESEAAAFFDQISRYFISRAKIVSXVAK 787
+ WI +IPKIEDGN+FGV+IQE L + +V+++ AF IS+YF R V+ +K
Sbjct: 121 VITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASK 180
Query: 788 YPHIDDY 808
H+ DY
Sbjct: 181 ETHVMDY 187
>U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen
protein.
Length = 54
Score = 50.8 bits (116), Expect = 6e-06
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 434 PNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSN 604
P K++RLD E +GT+V+V+PNG + N+ L D+I VKP IR L+E N
Sbjct: 1 PTYKKRRLDECE----KAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 53
>AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.
Length = 1307
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = +2
Query: 260 KDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 439
K+SL K + ++ +K K+ + LE + + + + +P+PTPP EP
Sbjct: 351 KESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAVSLAE---LPLPTPPPAPPPEPE 407
Query: 440 AKRQRLDSSELSSNSTIEGTRVYVLPNG 523
+++ S S T +G P+G
Sbjct: 408 KEKEIHQSHVPSKTPTAKGKPQSEAPHG 435
>AB007137-1|BAA28836.1| 76|Homo sapiens PA28 alpha subunit
protein.
Length = 76
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 365 NLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELSSNSTIEGTRVYVLPNGSVPCNKP 544
NLS++ L+IP+P P E K+Q + + E P G V CN+
Sbjct: 11 NLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGP---PCGPVNCNEK 67
Query: 545 LSDLIHLVK 571
+ L+ +K
Sbjct: 68 IVVLLQRLK 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,519,108
Number of Sequences: 237096
Number of extensions: 2194908
Number of successful extensions: 5228
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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