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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H16
         (663 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.003
SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)                 39   0.003
SB_8542| Best HMM Match : PT (HMM E-Value=4)                           34   0.12 
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)              33   0.16 
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.36 
SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.63 
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.84 
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)                30   1.9  
SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5)                29   2.6  
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)                29   4.5  
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)              29   4.5  
SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)              28   5.9  
SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)              28   7.8  

>SB_19623| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 25/60 (41%), Positives = 31/60 (51%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDP 350
           PG V ++ +  PGHV+I   DPG    +IG PGYV I   P Y       P   I+I DP
Sbjct: 75  PGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGY-GMIIGDPGHVIIIGDP 129



 Score = 36.3 bits (80), Expect = 0.022
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDP 350
           PGH+ ++ +  PGHV+I   DP     +IG PG+V I   P Y       P   I+I DP
Sbjct: 21  PGHMIIIGD--PGHVMIIG-DPDHLM-IIGDPGHVMIIGDPGY-GMIIGDPGHVIIIGDP 75



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYV 302
           PG V ++ +  PGHV+I   DPG    +IG PGYV I   P ++
Sbjct: 129 PGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGHL 168



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYV 302
           PGHV ++ +  PG V+I   DPG    +IG PG++ I   P YV
Sbjct: 120 PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 159


>SB_7058| Best HMM Match : Collagen (HMM E-Value=0.018)
          Length = 188

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 25/60 (41%), Positives = 31/60 (51%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDP 350
           PG V ++ +  PGHV+I   DPG    +IG PGYV I   P Y       P   I+I DP
Sbjct: 69  PGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGY-GMIIGDPGHVIIIGDP 123



 Score = 36.3 bits (80), Expect = 0.022
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDP 350
           PGH+ ++ +  PGHV+I   DP     +IG PG+V I   P Y       P   I+I DP
Sbjct: 15  PGHMIIIGD--PGHVMIIG-DPDHLM-IIGDPGHVMIIGDPGY-GMIIGDPGHVIIIGDP 69



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYV 302
           PG V ++ +  PGHV+I   DPG    +IG PGYV I   P ++
Sbjct: 123 PGDVMIIGD--PGHVMIIG-DPGHMM-IIGDPGYVMIIGDPGHL 162



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYV 302
           PGHV ++ +  PG V+I   DPG    +IG PG++ I   P YV
Sbjct: 114 PGHVIIIGD--PGDVMIIG-DPGHVM-IIGDPGHMMIIGDPGYV 153


>SB_8542| Best HMM Match : PT (HMM E-Value=4)
          Length = 650

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 38/125 (30%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
 Frame = +3

Query: 195 NNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQ-RPIVINDPDP-FFAQ 368
           N+ P +    NP P +      QP Y P S  P     P   PQ R      P P ++  
Sbjct: 110 NSQPRYYHFGNPQPRYYPSENSQPRYYP-SGNPQPKYYPSGNPQPRYYPSGSPQPKYYPS 168

Query: 369 PTVGNGYEPIDN-RPYIV---NPPKDYNPNGN---GYEPIDN--GAYYVD-RPQGRPYFK 518
                 Y P  N +P+     NP   Y P+GN    Y P  N    YY    PQ R Y  
Sbjct: 169 GNPQPKYYPSGNPQPWYYPSGNPQPKYYPSGNPQSRYYPCGNPQPKYYPSGNPQPRYYPS 228

Query: 519 PTPFP 533
             P P
Sbjct: 229 GNPQP 233


>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
          Length = 2735

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +3

Query: 201  HPGHVLISNPDPGFXRP--VIGQPGYVPISTGPAYVNRP---YNRPQRPIVINDPDPFFA 365
            HP   +   PD    RP  VI +P  V +   P  V+RP   Y++P  P+V++ P P   
Sbjct: 1363 HPPPEVYHRPDVVLHRPDIVIHRPSVV-LHQAPVVVHRPAVVYHQP--PVVVHQPPPLVH 1419

Query: 366  QPTV 377
            QP +
Sbjct: 1420 QPII 1423



 Score = 33.1 bits (72), Expect = 0.21
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
 Frame = +3

Query: 213 VLISNPDPGFXRP--VIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNG 386
           V++  PD  +  P  +  +P  +       Y        Q  +VI+ P   + QP V   
Sbjct: 237 VMVQRPDMVYHPPPEIYDRPDVIVHRPDLVYHQPSIVYHQASVVIHRPPIVYHQPPVVFH 296

Query: 387 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPGARG 545
             P  N+  I+N    Y P+   +EP  +  ++V    G P+F P     A G
Sbjct: 297 QPPPMNKQPIMNSIDAYVPHAF-FEPHSSEVHHVATYNGAPHFYPASSGNAYG 348



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
 Frame = +3

Query: 183 NVVDNNHPGHVLISNPDPG-FXRP--VIGQPGYVPISTGPAY------VNRP---YNRPQ 326
           NV+  N P   +I +P P  + RP  V+ QP YV       Y      V+RP   Y++P 
Sbjct: 534 NVIVVNRPP--MIYHPPPEIYDRPDVVVHQPDYVIHRPSVVYHQPSVVVHRPPIVYHQP- 590

Query: 327 RPIVINDPDPFFAQPT-------VGNGY-EP----IDNRPYIVNPPKDYNPNGNGYEP 464
            P+V + P P   QP        V + Y EP    I +    V  P  Y P G GY P
Sbjct: 591 -PVVFHQPPPMVRQPVMHSHDTYVAHAYHEPYASTISHAATYVGAP-HYYPGGFGYGP 646


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
 Frame = +3

Query: 267 GYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPN 446
           G+ P +  P   N PY  P  P     P P+   P     Y P  N PY   P   Y P 
Sbjct: 82  GHPPTNFSP---NPPYPPPPYP-PYPPPPPY--PPPPNPPYPPPPNAPYPPPPNPPYPPP 135

Query: 447 GNG-YEPIDNGAY--YVDRPQGRPYFKPTPFP 533
            N  Y P  N  Y    + P   P + P P P
Sbjct: 136 PNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167



 Score = 28.3 bits (60), Expect = 5.9
 Identities = 30/102 (29%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
 Frame = +3

Query: 228 PDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEPIDNR 407
           P+P +  P        P +  P   N PY  P  P   N P P    P     Y P  N 
Sbjct: 128 PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPP--YPPPPNP 185

Query: 408 PYIV--NPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 527
           PY    NPP    PN     P  N  Y        P + P P
Sbjct: 186 PYPPPPNPPYPPPPNAPN-PPPPNPPYPPPPNAPNPPYPPPP 226


>SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 342

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +3

Query: 186 VVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDP 356
           VV++N    V    P PG   PV+G P  VP        + P +R   PIV+++PDP
Sbjct: 240 VVEDNRRNPVEAVEPHPGCGTPVVGFP--VP--------DVPEHRLSPPIVVSEPDP 286


>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1331

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
 Frame = +3

Query: 264 PGYVPISTGPAYVNRPYNRPQRPIV----INDP---DPFFAQ-PTVGNGY-EPIDNRPYI 416
           PG VP    PA++N P++ P  P +    +  P    PF A  P VG+G+  P  +RP+ 
Sbjct: 698 PGMVPPLWQPAFLNSPFSNPPSPFMGYPGLAQPWPVPPFRAHYPVVGSGWCLPRHDRPFD 757

Query: 417 V 419
           V
Sbjct: 758 V 758


>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
          Length = 515

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 32/120 (26%), Positives = 41/120 (34%)
 Frame = +3

Query: 171 PGHVNVVDNNHPGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDP 350
           PG    V  N P   +   P PG        P  +P++   +     +N P R    NDP
Sbjct: 253 PGDPRRVPGNDPRRPVNDGPKPGILGSPPRGPDNLPLAPPTSGDMDAFNMPGRGPHQNDP 312

Query: 351 DPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 530
             F  +   G      DN       P   N N  G+ P   G      PQ RP+    PF
Sbjct: 313 RNF--RQDAGP-----DN-------PFPGNQNSRGFNPAGRGPAGGREPQDRPWSNDGPF 358


>SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +3

Query: 189 VDNNHPGHVLISNPDPGFXRPVIGQP-GYVPISTGPAYVNRPYNRPQRPIV-INDPDPFF 362
           ++ N P ++  + P     RP I     Y   +      NRPY    RP + IN P    
Sbjct: 26  INTNRP-YINTNRPYININRPYINTSRAYFDTNWPYINTNRPYININRPYININRPYINT 84

Query: 363 AQPTVGNGYEPID-NRPYIVNPPKDY 437
           ++      +  I+ NRPYI +PP  +
Sbjct: 85  SRAYFDTNWPYINHNRPYIESPPPQF 110


>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1572

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 1/105 (0%)
 Frame = +3

Query: 228 PDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEPIDNR 407
           P PG   P +  PG       P   + P   P        P P    P V     P    
Sbjct: 532 PPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRV 591

Query: 408 PYIVNPPKDYNPNGNGYEPID-NGAYYVDRPQGRPYFKPTPFPGA 539
           P    P     P G  Y+ +  +GAY+   P   P ++  P PGA
Sbjct: 592 PPPGAPHPKVPPPGAPYQRLPYSGAYHPRLPPPGPPYQRVPPPGA 636


>SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5)
          Length = 430

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = +3

Query: 171 PGHVNVVD---NNHPGHVLISNPDPGFXRP--VIGQPGYVPISTGPAYVNRPYNRPQRPI 335
           PGH+N +    NN P H L + PD    +P  +  +P ++       Y N+PY+    P 
Sbjct: 58  PGHLNNMPDHLNNKPDH-LNNKPDHLNNKPDHLNNKPDHLNNKPEHLY-NKPYHLHNMPD 115

Query: 336 VINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPN 446
            +N+           N  + +DN+PY +N   D+  N
Sbjct: 116 HLNNKADHLY-----NNLDHLDNKPYHLNNKLDHLNN 147


>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2851

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
 Frame = +3

Query: 375 VGNGYEPIDNRP----YIVNPPKDYNPNGNGYEPID-NGAYYVDRPQGRPYFKPTPFP 533
           VG  +E  + RP    Y   PP DY  N N Y P   NG Y   RP    Y  P   P
Sbjct: 244 VGRDHEMYNGRPGPGGYYRRPPHDYQFNRN-YPPNQYNGNYQGGRPPPHGYGDPNGRP 300


>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
          Length = 839

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 421 ILPKTTTLMETATNLSTTVHITWTVPKADLTSS 519
           + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 236 LAPKTTTALETTVEAKTTV-VPETTPALETTSA 267


>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
 Frame = +3

Query: 210 HVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRP---IVINDPDP--FFAQPT 374
           H   +N  PG      G P +   +     +N P   PQ P     ++ P P      P+
Sbjct: 110 HCQKANRSPGHVGGTAGTPSFATTT-----INYPPPGPQAPPPGSTVHYPPPQTTMGYPS 164

Query: 375 VGNGYEPIDNRPYIVNPPKDYNPNGNGY 458
              G+ P  N P    PP  Y P   GY
Sbjct: 165 AQPGFAPPGNYPPPPAPPPAYPPVTQGY 192


>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1295

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 252 VIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPD---PFFAQPTVGNGYEP 395
           V+G   Y P    P    +P ++P  P ++NDP+   P+++Q   G+ Y P
Sbjct: 200 VLGSVPYRPPMPPPQAYWQPASQPSAPPLMNDPNQAPPYYSQQ--GSAYPP 248


>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
          Length = 3094

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 421  ILPKTTTLMETATNLSTTVHITWTVPKADLTSS 519
            + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 2298 LAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329



 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 421 ILPKTTTLMETATNLSTTVHITWTVPKADLTSS 519
           + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 783 LAPKTTTALETTVAAKTTV-VPETTPALETTSA 814


>SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 134

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +3

Query: 309 PYNRPQRPIVINDPDPFFAQPTVG---NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGA 479
           PY  P+ P  +  P     + T G   N YEPI         P DY P  + YEP+ +  
Sbjct: 23  PYRAPKSPYRV--PKSSLTKTTSGSVSNTYEPI---------PSDYEPVPSDYEPVPSTL 71

Query: 480 YYVDRPQGRPY 512
             +  P+  PY
Sbjct: 72  EPIQTPES-PY 81


>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
          Length = 1099

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +3

Query: 201 HPGHVLISNPDPGFXRP--VIGQPGYVPISTGPAYVNRP---YNRPQRPIVINDPDPFFA 365
           HP   +   PD    RP  VI +P  +     P  V+RP   Y++P  PI+ + P P  +
Sbjct: 152 HPPPEIYHRPDIVVHRPPLVIHRPPII-YHQPPVIVHRPAVVYHQP--PIIFHQPPPAVS 208

Query: 366 QP 371
           QP
Sbjct: 209 QP 210


>SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 23/93 (24%), Positives = 33/93 (35%)
 Frame = +3

Query: 246 RPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEPIDNRPYIVNP 425
           R  + Q  Y P   GP  ++      +     N  +   A+  V +GY+  DN  Y    
Sbjct: 344 RATLKQRKYTP-KPGPRSIDHRTEVNEDQTYDNTENEIHAEAHV-DGYQTYDNPTYDTEH 401

Query: 426 PKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 524
                 + NGY   DN       P   P +K T
Sbjct: 402 ETHAEAHVNGYPTYDNPTCDTHSPARAPAYKRT 434


>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
          Length = 622

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +3

Query: 348 PDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 527
           PD  F    + +  E +   PYI+  P   N    G   I N    + RP+G P  +P+ 
Sbjct: 379 PDTNFGVFRMHHVIEVVSTVPYILLRPCISN---KGVSAIGNCQMAILRPKGYPPQQPSY 435

Query: 528 FPGARGG 548
            PG  GG
Sbjct: 436 PPGGYGG 442


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,139,149
Number of Sequences: 59808
Number of extensions: 434361
Number of successful extensions: 1270
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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