Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H16
         (663 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    32   0.32 
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical ...    29   3.9  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +3

Query: 345 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 515
           DP+   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY 
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401

Query: 516 KPTPFPGARG 545
              P P   G
Sbjct: 402 SDVPAPYPSG 411


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 366 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 464
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 366 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 464
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 366 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 464
           QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 291 PAYVNRPYNRPQRPIVINDPDPFFAQPTVGNGYEP 395
           P++   P   PQ P V + P PF   PT+GNG  P
Sbjct: 272 PSHQVNPAPMPQAPPV-STPVPFPPSPTIGNGAVP 305


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical
           protein C50F7.5 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +3

Query: 213 VLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPY-NRPQRPIVIN-DPDPFFAQPTVGNG 386
           V+ S+ DP     V+ QP   P     A  + P  + P  P  +N   DP  + P     
Sbjct: 67  VIASSADPILPTSVVPQPSNEPSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGP 126

Query: 387 YEPIDNRPYIVNPPKDYNPNG 449
            +P ++    V P +D+ P+G
Sbjct: 127 VDPSEDPQPSVEPSEDHQPSG 147


>AC006696-4|AAF39985.1|  215|Caenorhabditis elegans Hypothetical
           protein W08E12.6 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +3

Query: 204 PGHVLISNPDPGFXRPVIGQPGYVPISTGPAYVNRPYNRPQRPIVINDPDPFF--AQPTV 377
           P  + ++ P P    P  G P   P   GPA V      P  PI++N P P F  A P  
Sbjct: 50  PAPIFVAPPPP----PCFG-PACPPPCFGPACV------PLAPIIVNGPPPCFGPACPPP 98

Query: 378 GNGYEPIDNRPYIVN-PPKDYNP 443
             G       P IVN PP  + P
Sbjct: 99  CFGPACAPPAPIIVNGPPPCFGP 121



 Score = 27.5 bits (58), Expect = 9.0
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +3

Query: 264 PGYVPISTGPAYVNRPYNRPQRPIVINDPDPFF--AQPTVGNGYEPIDNRPYIVN-PPKD 434
           P + P    P +   P   P  PI++N P P F  A P    G     + P IVN PP  
Sbjct: 89  PCFGPACPPPCF--GPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPPPC 146

Query: 435 YNP 443
           + P
Sbjct: 147 FGP 149


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 433 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 531
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +3

Query: 390 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 476
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


>Z68748-6|CAD27621.1|   88|Caenorhabditis elegans Hypothetical
           protein F13H10.6 protein.
          Length = 88

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +3

Query: 387 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 527
           Y+P +  P     P    P   GY P   G YY    QG PY+   P
Sbjct: 3   YQPYNQPPPYTQQPGYPPPGSAGYVPQ-QGGYYPQGQQG-PYYPQQP 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,947,309
Number of Sequences: 27780
Number of extensions: 322489
Number of successful extensions: 807
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)