Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H12
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.80 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.9  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.9  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 172 VIISHIGDMYCVHYY 128
           ++  HIGD+ CV +Y
Sbjct: 192 ILYDHIGDLVCVDFY 206


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 400 TNYFWFHCTCIIIE 359
           TN  W HC C++ +
Sbjct: 145 TNTVWSHCQCVLAD 158


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 400 TNYFWFHCTCIIIE 359
           TN  W HC C++ +
Sbjct: 145 TNTVWSHCQCVLAD 158


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 230 SFSENEEYIKSCPSVDQENMTECSSLLYPCITC 328
           S +EN +Y     +VD + + +   LL   + C
Sbjct: 17  SLAENSKYTTKYDNVDLDEIIKSDRLLKNYVNC 49


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 707 VYQCLLANDQDKS 669
           +YQC + NDQ+ +
Sbjct: 387 MYQCFIRNDQESA 399


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 485 PFVHNDVPIYQFDSK 441
           P  H  +P YQ DSK
Sbjct: 138 PPAHMGIPPYQLDSK 152


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 485 PFVHNDVPIYQFDSK 441
           P  H  +P YQ DSK
Sbjct: 30  PPAHMGIPPYQLDSK 44


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 40  WKQQCFDFQHASXSAFTYXHSSLFYFDFIS 129
           W+QQ  DF H    +F   +    Y  F S
Sbjct: 122 WRQQYEDFWHRYTLSFIENYCQFLYNCFHS 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,037
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)