Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_H08
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 29 0.49
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 29 0.65
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 28 1.1
SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein |Sch... 27 2.0
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.5
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 26 6.1
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 26 6.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 25 8.0
SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 8.0
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.5 bits (63), Expect = 0.49
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 388 VYDENTGDHKTQHELSDGSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKKFLPVNVE 567
+ DE T KT +LSD + L + + +I ++ V DDL + K+ L +V+
Sbjct: 93 ILDELTRSSKTHQKLSDDYSLDIAEKLKKLESHIEALRKVYDDLYKKFSSEKETLLNSVK 152
Query: 568 K-KIEHHEKSHPDPPCHEVKNEQLKVETKTEHS 663
+ K+ +HE + D KN++ + E KT+ +
Sbjct: 153 RAKVSYHE-ACDDLESARQKNDKYR-EQKTQRN 183
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 29.1 bits (62), Expect = 0.65
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Frame = +1
Query: 619 VKNEQLKVET---KTEHSESHHAPIV 687
VK+E L+ ET KTEH++S+H P V
Sbjct: 129 VKDEGLRTETIVKKTEHADSNHQPAV 154
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -3
Query: 339 YWNTGLICYYICSGRGY*LPRIYTGRSTWRD*IWYY*SXQGLQIFGLVVILLRRLMERHI 160
+W T I Y+ GY P Y GR+ W +W +Q G+ +ILL+ L RH+
Sbjct: 2280 FWATSNIGLYL-PWAGYSGP--YLGRTLW---LWLG-VLDAIQSVGIGMILLQTLTRRHV 2332
Query: 159 VS 154
S
Sbjct: 2333 AS 2334
>SPBC15C4.03 |||Rab geranylgeranyltransferase escort protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +1
Query: 373 EYSYLVYDENTGDHKTQHELSDGSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKKFL 552
+YSYL+ TG Q +V+ G + L Q I E K V D G KK +
Sbjct: 245 DYSYLLAMYGTGSELCQGFCRSSAVMGGTFMLGQAIDKIDESKIVLKD--GSTLSAKKIV 302
Query: 553 PVNVEKKIEHHE 588
E K+ H +
Sbjct: 303 SSVDEGKLPHQQ 314
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = +1
Query: 580 HHEKSH--PDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHE 702
HHE P PP H E + H H P HHE
Sbjct: 200 HHEPGEHMPPPPMHHKPGEHMP-PPPMHHEPGEHMPPPPMHHE 241
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/43 (30%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = +1
Query: 580 HHEKSH--PDPPCHEVKNEQLKVETKTEHSESHHAPIVXEHHE 702
HHE P PP H E + H P +HHE
Sbjct: 304 HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHE 346
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 6.1
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Frame = +1
Query: 385 LVYDENTGDHKTQH-ELSDGSVVR---GGYSLIQPDGYIREVKYVADDLTGFNAVVKKFL 552
L+Y G Q LSD +++ G Y +I + I E+ V + F
Sbjct: 153 LIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFT 212
Query: 553 --PVN---VEKKIEHHEKSHPDPPCHEVKNEQLK 639
PV +EKK++H + C E NE +K
Sbjct: 213 LTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIK 246
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 580 HHEKSHPDPPCHEVKNEQLKVETKTEHSESH 672
HH SH D P + +Q V + +E + H
Sbjct: 307 HHHHSHDDDPSSPAEKKQNHVPSPSEKIQDH 337
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 155 VFNWHYFSSALYEYFRE*STSYNINCGD 72
VFN H++SS + E + + +NI+ D
Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSD 225
>SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 547 FLPVNVEKKIEHHEKSHPDPPCHEVKNEQLKVETKTE-HSESH 672
FL + E + HP PP H + +KV K++ H ++H
Sbjct: 73 FLASSCEITVRLSSGGHPSPPVHIYMSALIKVCKKSKPHLQTH 115
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,627,020
Number of Sequences: 5004
Number of extensions: 50796
Number of successful extensions: 115
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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