Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H05
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287...    29   3.5  
02_04_0271 + 21445113-21445865,21446727-21446788,21446927-214470...    28   6.2  
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962...    28   8.1  
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963...    28   8.1  

>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
            2879715-2879973,2880060-2880346,2880423-2880758,
            2880862-2881003,2881077-2881297,2881379-2881540,
            2881617-2881775,2881860-2882159,2882834-2883097,
            2883133-2883243,2883902-2883988
          Length = 1871

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 22/70 (31%), Positives = 28/70 (40%)
 Frame = +2

Query: 248  YRPTRRSVFPELLSTYPYSKSIYDDPIAAAERITVPGYRYLPVHREIYGYSPRPIYAHNY 427
            Y PT  +  P   S  P S S    P + +   T P Y Y P       YSP    ++NY
Sbjct: 1683 YNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSP---SYSPTS-PSYNY 1738

Query: 428  PRSLDYYRPT 457
              +   Y PT
Sbjct: 1739 SPTSPSYSPT 1748


>02_04_0271 +
           21445113-21445865,21446727-21446788,21446927-21447027,
           21447165-21447248,21448054-21448058,21448193-21448267,
           21448339-21448416,21448896-21448952,21449351-21449421,
           21449529-21449628,21449758-21449862,21450004-21450066,
           21450144-21450266,21450371-21450514,21450598-21450672
          Length = 631

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 30  GPTLDVGSSTTPHYPI*LRPLFNRIRARHRPPKCSKHI 143
           GPT    SS+  H P        RIRA    P+CSKH+
Sbjct: 47  GPTSSSSSSSDEHEP-------RRIRAEAHCPRCSKHM 77


>04_03_0024 -
           9623178-9624001,9624502-9624678,9625144-9625305,
           9625520-9626032,9626801-9629153
          Length = 1342

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 211 SKRFGRHQSRGKVQANTPQR-FSRTPVDLPLLQV-DLRRPYRCR 336
           SKR  +HQ+R      T +R F R PV LP  ++  +R P + +
Sbjct: 759 SKRIYKHQNRNNNNIRTKKRYFLRRPVRLPFKEILGIRIPVKVK 802


>03_02_0865 -
           11895257-11895340,11896004-11896069,11896297-11896355,
           11896470-11896557,11897158-11897328,11897406-11897564,
           11897653-11897835,11897931-11898012,11898753-11898959,
           11899099-11899170,11901948-11902055,11902460-11902506
          Length = 441

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +1

Query: 4   PADECAPVPVRHSTSARPRHHTTLFNYDRYLTEYEHDIDRQNVQNTFRHDWQKRDAVEES 183
           PA    P P + S + +P H T L + +  L   + D+D++ V+ T +H+     AV++S
Sbjct: 200 PAPPPPPPPPQPSAANKP-HLTDLSSDESELESSDEDVDKRKVKRT-KHEAIVGPAVDKS 257


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,595,750
Number of Sequences: 37544
Number of extensions: 377658
Number of successful extensions: 1113
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)