Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_H04
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.38 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 15/57 (26%), Positives = 22/57 (38%)
 Frame = +3

Query: 528 GWLHTINAYKGTGAELPVNLKFIFECMEESGSEGLDSLLMDKLKPEGFFDSVDYVCI 698
           GW      +K   +       FIF  +      G D L +D   P+G  D  +YV +
Sbjct: 169 GWSFGTQKFKDMASTRYARQTFIFSAIPFLRDRGFDGLDIDWEYPKGSEDKKNYVLL 225


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = -1

Query: 465 VQKVQSPIHQISKQVVH 415
           V+K+++ +HQ++ +V+H
Sbjct: 502 VEKLETLVHQLNTEVLH 518


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 687 SQHYQRIPQVSICPLISCQALRNQ 616
           SQ+Y  +P V+ CP+      R Q
Sbjct: 209 SQYYDGVPFVTQCPIQQGNTFRYQ 232


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 687 SQHYQRIPQVSICPLISCQALRNQ 616
           SQ+Y  +P V+ CP+      R Q
Sbjct: 209 SQYYDGVPFVTQCPIQQGNTFRYQ 232


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 249 PYGCNPHDISH 217
           P G NPHDI++
Sbjct: 749 PVGTNPHDINN 759


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 249 PYGCNPHDISH 217
           P G NPHDI++
Sbjct: 641 PVGTNPHDINN 651


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 435 ISKQVVHPNDHRYKLYFFLDHYPIRLLKLAAVERLCHLLFESQ 307
           I+KQ++      Y+LY +     I +L+       C L++E Q
Sbjct: 534 ITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASPTCDLMYEFQ 576


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 92  TSFCKNGNGK 121
           T FC+NGN K
Sbjct: 695 TCFCENGNNK 704


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,096
Number of Sequences: 336
Number of extensions: 4395
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)