Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_G17
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          26   0.37 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           26   0.37 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.49 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.49 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   6.0  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   6.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 458 DKTCTPKAFPAAMAGLSSPRSIATDA 381
           +K  TP++ PA  A   SP+S+A+ A
Sbjct: 149 NKVSTPRSSPAETASSLSPQSVASTA 174


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 458 DKTCTPKAFPAAMAGLSSPRSIATDA 381
           +K  TP++ PA  A   SP+S+A+ A
Sbjct: 140 NKVSTPRSSPAETASSLSPQSVASTA 165


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
 Frame = -2

Query: 482 PTRRPP--VPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSR-PNTGRY 345
           P ++ P   P  + TP + P      S+P   +   + +CS  P T  Y
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASY 114


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 491 NSAPTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNT 354
           NSA +  PP  ++  +P   P  +   SSPRSI+ D L     PN+
Sbjct: 40  NSAASPAPP-EEEAASPT--PGDVPTPSSPRSISEDPLNCRDLPNS 82


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 509 LRCLLRNSAPTRRPPVPDKT 450
           +RC LR   P R+P  P  T
Sbjct: 105 VRCALRKHKPNRKPRTPFTT 124


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 597 PLLGREDQGHRLRRFHRRPQERSGECRHTAARMRPQSHRHXPHQ 728
           P+L     G R R+     +E S + +H + R  PQS     HQ
Sbjct: 55  PVLKSRSFG-RKRKSISSDEENSFQGKHKSRRKAPQSFEDIQHQ 97


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 395 CSLVRIVLPSPLEKLLVCKSCP 460
           C+L    LP    +L  C  CP
Sbjct: 489 CALTTRELPGETLRLFTCMECP 510


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 395 CSLVRIVLPSPLEKLLVCKSCP 460
           C+L    LP    +L  C  CP
Sbjct: 496 CALTTRELPGETLRLFTCMECP 517


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 493 GTLRRRADHQSRTRLA 446
           G LRRR+   SR+RLA
Sbjct: 173 GKLRRRSTAASRSRLA 188


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 226 EKYPQ*KVCLTKTPLSGGLVRHLGI 152
           EK  + K+CL +   SG L RH+ +
Sbjct: 103 EKPYECKLCLLRFSQSGNLNRHMRV 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 226 EKYPQ*KVCLTKTPLSGGLVRHLGI 152
           EK  + K+CL +   SG L RH+ +
Sbjct: 359 EKPYECKLCLLRFSQSGNLNRHMRV 383


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 439 FGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 531
           + +  L G   LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 102 DRLK*FKDNYYLLINMHQKI 43
           D++    DN Y+L  +H K+
Sbjct: 221 DKIPQISDNLYILCRLHYKL 240


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 439 FGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 531
           + +  L G   LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 102 DRLK*FKDNYYLLINMHQKI 43
           D++    DN Y+L  +H K+
Sbjct: 221 DKIPQISDNLYILCRLHYKL 240


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 474 QTTSPGQDLHTKSFSSGDGRTILTKEHSHRRIT 376
           +T  PG  +  K  +SG+    +T E   RR++
Sbjct: 423 ETVQPGNSVFLKCIASGNPTPEITWELYGRRLS 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,041
Number of Sequences: 336
Number of extensions: 4486
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)