Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_G16
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0502 + 24947444-24947665,24947768-24947823,24947929-249480...    90   2e-18
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725...    31   1.1  

>03_05_0502 +
           24947444-24947665,24947768-24947823,24947929-24948099,
           24948508-24948631,24949086-24949142,24949216-24949312,
           24949619-24949826,24950637-24950697,24950793-24950846
          Length = 349

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
 Frame = +3

Query: 207 RDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRH-TLDNGKSVLTSFGMFRECPSIPQHY 383
           R+   +VA  + + + G    Q++ DFD TLTR+   +    V    G         + Y
Sbjct: 59  RNPGSVVADADGLARKGLELPQVIADFDGTLTRYWEFERCMCVYVVVGSHGLLRQGNEEY 118

Query: 384 KDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALL-KGVQFPRSELTHVANKMID 560
             +   L   Y PIE  P + + EK K M +W+   HALL +G     +    VA+  I 
Sbjct: 119 DAKREELFEHYHPIEICPDIPLPEKAKLMEEWWEKTHALLIEGGLTYEAIRQSVADAKI- 177

Query: 561 SFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAA-NFLLPHVKVVSNFLALDENDK 737
           +FR GV +L  + +  ++PVLVFSAGL + +    +   +    ++KVVSN +  +E  +
Sbjct: 178 TFRDGVVKLFEFLEERDIPVLVFSAGLADIIEEVFRQKLHRSFKNIKVVSNRMVFNEEGR 237

Query: 738 IVGIKGEVIXTYNKNETAI 794
           +V  KG+ I   NKNE A+
Sbjct: 238 LVSFKGKTIHVLNKNEHAL 256


>02_04_0052 +
           19271014-19271627,19272055-19272224,19272321-19272550,
           19272657-19272765,19272858-19272985,19273102-19273203,
           19273285-19273566,19273660-19273769,19273851-19274145,
           19274242-19274475,19274705-19274935,19275167-19275478
          Length = 938

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +3

Query: 588 IIWSQTHEVPVLVFSAGLGESVVA---ALKAANFLLPHVKVVSNFLALDENDKIVGIK 752
           II  +T   P+L+  AG+G++ +A   AL+ AN  +P   V    ++LD    I G K
Sbjct: 298 IICRRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAK 355


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,224,677
Number of Sequences: 37544
Number of extensions: 447201
Number of successful extensions: 1279
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)