Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_G16
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-11|AAL27245.1| 327|Caenorhabditis elegans Hypothetical p... 115 5e-26
U23172-10|AAM22066.1| 352|Caenorhabditis elegans Hypothetical p... 115 5e-26
U23172-9|AAK67227.1| 362|Caenorhabditis elegans Hypothetical pr... 115 5e-26
U23172-7|AAK67228.1| 376|Caenorhabditis elegans Hypothetical pr... 115 5e-26
AL161711-4|CAC44301.2| 301|Caenorhabditis elegans Hypothetical ... 80 2e-15
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.33
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.33
Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.44
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.3
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF038623-5|AAO91700.1| 531|Caenorhabditis elegans Hypothetical ... 28 7.2
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U23172-11|AAL27245.1| 327|Caenorhabditis elegans Hypothetical
protein F25B5.3c protein.
Length = 327
Score = 115 bits (276), Expect = 5e-26
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Frame = +3
Query: 192 ENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPS 368
E I + D T + AKL +++ GG K +++DFD+TL+R + G+ + T+ G+F +
Sbjct: 40 EQILVADPTAVAAKLRKMVVGGAGKTVVISDFDYTLSRFANEQGERLSTTHGVFDDNVMR 99
Query: 369 IPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELTHVAN 548
+ + V L + Y PIE P +T+EEK HM W+ +H+L+ +F ++ +
Sbjct: 100 LKPELGQKFVDLKNKYYPIEFSPNLTMEEKIPHMEKWWGTSHSLIVNEKFSKNTIEDFVR 159
Query: 549 KMIDSFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAANFLLP-HVKVVSNFLALD 725
+ F+ G ++ I H +P+++FSAG+G + L+ +P + +SN + D
Sbjct: 160 QSRIVFKDGAEDFIEALDAHNIPLVIFSAGIGNIIEYFLQQKLGAIPRNTHFISNMILFD 219
Query: 726 ENDKIVGIKGEVIXTYNKNETAI-KNTDYYN 815
E+D +I T+ KN + I K T +++
Sbjct: 220 EDDNACAFSEPLIHTFCKNSSVIQKETSFFH 250
>U23172-10|AAM22066.1| 352|Caenorhabditis elegans Hypothetical
protein F25B5.3d protein.
Length = 352
Score = 115 bits (276), Expect = 5e-26
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Frame = +3
Query: 192 ENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPS 368
E I + D T + AKL +++ GG K +++DFD+TL+R + G+ + T+ G+F +
Sbjct: 65 EQILVADPTAVAAKLRKMVVGGAGKTVVISDFDYTLSRFANEQGERLSTTHGVFDDNVMR 124
Query: 369 IPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELTHVAN 548
+ + V L + Y PIE P +T+EEK HM W+ +H+L+ +F ++ +
Sbjct: 125 LKPELGQKFVDLKNKYYPIEFSPNLTMEEKIPHMEKWWGTSHSLIVNEKFSKNTIEDFVR 184
Query: 549 KMIDSFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAANFLLP-HVKVVSNFLALD 725
+ F+ G ++ I H +P+++FSAG+G + L+ +P + +SN + D
Sbjct: 185 QSRIVFKDGAEDFIEALDAHNIPLVIFSAGIGNIIEYFLQQKLGAIPRNTHFISNMILFD 244
Query: 726 ENDKIVGIKGEVIXTYNKNETAI-KNTDYYN 815
E+D +I T+ KN + I K T +++
Sbjct: 245 EDDNACAFSEPLIHTFCKNSSVIQKETSFFH 275
>U23172-9|AAK67227.1| 362|Caenorhabditis elegans Hypothetical
protein F25B5.3a protein.
Length = 362
Score = 115 bits (276), Expect = 5e-26
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Frame = +3
Query: 192 ENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPS 368
E I + D T + AKL +++ GG K +++DFD+TL+R + G+ + T+ G+F +
Sbjct: 75 EQILVADPTAVAAKLRKMVVGGAGKTVVISDFDYTLSRFANEQGERLSTTHGVFDDNVMR 134
Query: 369 IPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELTHVAN 548
+ + V L + Y PIE P +T+EEK HM W+ +H+L+ +F ++ +
Sbjct: 135 LKPELGQKFVDLKNKYYPIEFSPNLTMEEKIPHMEKWWGTSHSLIVNEKFSKNTIEDFVR 194
Query: 549 KMIDSFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAANFLLP-HVKVVSNFLALD 725
+ F+ G ++ I H +P+++FSAG+G + L+ +P + +SN + D
Sbjct: 195 QSRIVFKDGAEDFIEALDAHNIPLVIFSAGIGNIIEYFLQQKLGAIPRNTHFISNMILFD 254
Query: 726 ENDKIVGIKGEVIXTYNKNETAI-KNTDYYN 815
E+D +I T+ KN + I K T +++
Sbjct: 255 EDDNACAFSEPLIHTFCKNSSVIQKETSFFH 285
>U23172-7|AAK67228.1| 376|Caenorhabditis elegans Hypothetical
protein F25B5.3b protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Frame = +3
Query: 192 ENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTSFGMFRE-CPS 368
E I + D T + AKL +++ GG K +++DFD+TL+R + G+ + T+ G+F +
Sbjct: 89 EQILVADPTAVAAKLRKMVVGGAGKTVVISDFDYTLSRFANEQGERLSTTHGVFDDNVMR 148
Query: 369 IPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELTHVAN 548
+ + V L + Y PIE P +T+EEK HM W+ +H+L+ +F ++ +
Sbjct: 149 LKPELGQKFVDLKNKYYPIEFSPNLTMEEKIPHMEKWWGTSHSLIVNEKFSKNTIEDFVR 208
Query: 549 KMIDSFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAANFLLP-HVKVVSNFLALD 725
+ F+ G ++ I H +P+++FSAG+G + L+ +P + +SN + D
Sbjct: 209 QSRIVFKDGAEDFIEALDAHNIPLVIFSAGIGNIIEYFLQQKLGAIPRNTHFISNMILFD 268
Query: 726 ENDKIVGIKGEVIXTYNKNETAI-KNTDYYN 815
E+D +I T+ KN + I K T +++
Sbjct: 269 EDDNACAFSEPLIHTFCKNSSVIQKETSFFH 299
>AL161711-4|CAC44301.2| 301|Caenorhabditis elegans Hypothetical
protein Y10G11A.1 protein.
Length = 301
Score = 80.2 bits (189), Expect = 2e-15
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +3
Query: 198 IHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTSFGMFRECPSIPQ 377
+H++D L KL I+ GG ++L +++DFD TL+R +G + + +F
Sbjct: 16 VHVKDIKSLTDKLQNIVSGGADQLMVISDFDFTLSRFADKSGNRCSSCYCVFDSAVGTNN 75
Query: 378 -HYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELTHVANKM 554
+ + V L Y PIE D +++EEK M W+ +H L+ F + +
Sbjct: 76 PEWCRKFVGLYHKYGPIEHDHSLSIEEKVPFMEAWWQQSHGLIIQGGFKKQAIDDYVAHC 135
Query: 555 IDSFRKGVKELIIWSQTHEVPVLVFSAGLGESVVAALK-AANFLLPHVKVVSNFLALDEN 731
R ++ H VP ++FSAG+G + L+ + + VVSN + D++
Sbjct: 136 NIQLRDNADIMMKKMTNHAVPFIIFSAGIGTIIEMYLRHKFGRVESNTHVVSNMMGFDDD 195
Query: 732 DKIVGIKGEVIXTYNKNETAI 794
+ +I + KN + +
Sbjct: 196 GYVNSFSDPLIHVFCKNSSVM 216
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 432 DPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELT-HVANKMIDSFRKGVKELIIWSQTH 608
DP V +K K + +W I+ L G + P +L HV +DS K ++ I ++
Sbjct: 333 DPKRNVTQKPKAVENWIISP---LTGERIPSDKLAEHVRYNTVDSQYKEDRDRHIGERST 389
Query: 609 EVPVLVFSAGLGESV 653
E PVL A + ++
Sbjct: 390 EEPVLALGADISRNL 404
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 432 DPVMTVEEKTKHMVDWYIAAHALLKGVQFPRSELT-HVANKMIDSFRKGVKELIIWSQTH 608
DP V +K K + +W I+ L G + P +L HV +DS K ++ I ++
Sbjct: 333 DPKRNVTQKPKAVENWIISP---LTGERIPSDKLAEHVRYNTVDSQYKEDRDRHIGERST 389
Query: 609 EVPVLVFSAGLGESV 653
E PVL A + ++
Sbjct: 390 EEPVLALGADISRNL 404
>Z95122-2|CAB08355.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 385 KTRMSG*QVYISPSRPTLL*PWKRRPNTWSIGILLLMHYSKEYNFQEAN 531
KT +G Q Y++P R T + R + WS+GI L + ++ +QE N
Sbjct: 225 KTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIATGKFPYQEWN 273
>Z48230-2|CAA88264.1| 363|Caenorhabditis elegans Hypothetical
protein F42G10.2 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 385 KTRMSG*QVYISPSRPTLL*PWKRRPNTWSIGILLLMHYSKEYNFQEAN 531
KT +G Q Y++P R T + R + WS+GI L + ++ +QE N
Sbjct: 225 KTHDAGCQPYLAPERITSSDKYDVRSDVWSLGITLYEIATGKFPYQEWN 273
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 745 PTILSFSSRAKKFDTTLTCGNXXXXXXXXATTDSPNPAENTSTGTS 608
PT + S+ +K TT T + TT +P P +TST TS
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTS 630
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 745 PTILSFSSRAKKFDTTLTCGNXXXXXXXXATTDSPNPAENTSTGTS 608
PT + S+ +K TT T + TT +P P +TST TS
Sbjct: 585 PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTS 630
>AF038623-5|AAO91700.1| 531|Caenorhabditis elegans Hypothetical
protein T08B6.9 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +3
Query: 207 RDETELVAKLNRIIKGGHNKLQIVTDFDHTLTR--HTLDNGKSVLTSFGMFRECPSIPQH 380
+DE+ L A++ ++ G NK +V +++ +T + DN K +T G+ CP
Sbjct: 305 QDESTLSARVTMKLQIGRNKTALVHEWNFKITAKYNQRDNKKWYIT--GLEFLCPPTITD 362
Query: 381 YKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWY 482
Y D + LA Y+ + A+ + V WY
Sbjct: 363 YMDLSL-LA--YREVVAEKFLLSLNSQVEPVKWY 393
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -1
Query: 292 WSKSVTICNLLCPPFMILFNFATSSVSSL-----IWMFSLLNS 179
WSK +T+ L P +LF S+S +WM+ L+ S
Sbjct: 365 WSKPITLLQCLICPVFLLFCIQVCSISPFPNSPGLWMYGLILS 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,602,738
Number of Sequences: 27780
Number of extensions: 394115
Number of successful extensions: 1037
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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