Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_G15
(599 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 147 2e-34
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 144 1e-33
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 131 1e-29
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 119 5e-26
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 116 3e-25
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 70 5e-11
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 68 2e-10
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 65 1e-09
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 3e-07
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 48 1e-04
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 45 0.001
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 44 0.003
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 35 1.7
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 34 2.2
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 2.9
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 5.1
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 9.0
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 147 bits (356), Expect = 2e-34
Identities = 69/148 (46%), Positives = 86/148 (58%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 257
M + + RKL GHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 258 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 437
+H ++N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 438 PVIVXXXXXXXXXXXXXXDVGGACVLSA 521
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 144 bits (349), Expect = 1e-33
Identities = 67/115 (58%), Positives = 76/115 (66%)
Frame = +3
Query: 177 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 356
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 357 PDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 521
D K PVI++VKA PKQPVIV VGGAC+L A
Sbjct: 80 KD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 131 bits (317), Expect = 1e-29
Identities = 69/150 (46%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXX--XXXXNAGGEHHHRINMDKYHPGYFGKLGM 251
M + K RKL GHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 252 RNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXP 431
R FH +KN CPV+N+DKLW+LVS+ TR KYA KVPVI++ KA P
Sbjct: 61 RTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLP 119
Query: 432 KQPVIVXXXXXXXXXXXXXXDVGGACVLSA 521
QPV+V VGGACVL+A
Sbjct: 120 NQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 119 bits (287), Expect = 5e-26
Identities = 59/140 (42%), Positives = 74/140 (52%)
Frame = +3
Query: 102 RKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 281
RK GHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH KN+
Sbjct: 60 RKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFHKLKNQT 119
Query: 282 FCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXX 461
CP +N+DKLWTLV + R + A + PVI++ P QPV+V
Sbjct: 120 VCPTINIDKLWTLVGTEKREECAK-NTSQAPVIDLTDHGIFKLLGKGQLPNQPVVVKCRY 178
Query: 462 XXXXXXXXXXDVGGACVLSA 521
+VGGAC+L+A
Sbjct: 179 ISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 116 bits (280), Expect = 3e-25
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 257
MAT+ K RK GHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 258 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPK- 434
FH +NK FCP++NLDKLW+LV E + K S+ D VP+I++ + P+
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPEN 117
Query: 435 QPVIVXXXXXXXXXXXXXXDVGGACVLSA 521
+P +V + GGA VL+A
Sbjct: 118 KPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 69.7 bits (163), Expect = 5e-11
Identities = 39/112 (34%), Positives = 53/112 (47%)
Frame = +3
Query: 186 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG 365
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 366 KVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 521
+VPVI+ + A P P IV + GG L A
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAGGVVKLVA 187
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/50 (44%), Positives = 23/50 (46%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 227
M T RK GHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/147 (25%), Positives = 64/147 (43%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 257
M K RKL GHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 258 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 437
+H ++N ++ ++ +LW ++ ++ R + P+ KVPVI++ + ++
Sbjct: 61 YHRKENSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDVREFGYHVVVGGKLSLER 119
Query: 438 PVIVXXXXXXXXXXXXXXDVGGACVLS 518
P++V VGG +++
Sbjct: 120 PIVVKARYFTPSAKEEITKVGGKWIIT 146
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 65.3 bits (152), Expect = 1e-09
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 257
M T + RK GHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 258 FHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG-KVPVINIVKAXXXXXXXXXXXPK 434
+ K NF +NLDK+ + + L ++ D + +I + K +
Sbjct: 61 YRKLKQNNFNKSINLDKISDKLVKNMHLHTKNSSDSFDLSLIGMSKVLGRGRMV-----Q 115
Query: 435 QPVIVXXXXXXXXXXXXXXDVGGACVLS 518
+P ++ GG C+L+
Sbjct: 116 KPFVIKANSFSKVAVKKIKKAGGYCILT 143
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 3e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +3
Query: 213 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 323
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 407 LVVSSFDNIDDGDLAIWSRC-ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKV 231
L V+ ++++ + SR +L +F D CP+ + VQ+W + L VE+SHT ++
Sbjct: 42 LTVTGCQSVNNWSSFLRSRFQVLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEI 101
Query: 230 SRMVLVHVDXXXXXXXXXXXXXXXXXVLSDTTMS 129
+ MV +HV+ VL+DTT +
Sbjct: 102 TWMVFIHVNSVVMLTTGHTSTTGVLSVLTDTTFT 135
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 257
M T K RK+ G S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 258 FHFRKNKN 281
++ K N
Sbjct: 61 YNLEKTLN 68
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 195 HHRINMDKYHPGYFGK--LGMRNFHFRKNKNFCPVLNLDKLWTLV 323
H R + PG G +GMR FH +NK +C ++NLDKLW++V
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 34.7 bits (76), Expect = 1.7
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 177 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 356
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 357 ---PDGKVPV 377
+GKV V
Sbjct: 89 FQVEEGKVVV 98
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 34.3 bits (75), Expect = 2.2
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = +3
Query: 78 MATSKKXPRKLXGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 230
M+ + RK GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 511 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 416
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 212 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 301
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 9.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 279 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 371
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,940,940
Number of Sequences: 1657284
Number of extensions: 9246009
Number of successful extensions: 21733
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21719
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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