Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_G10
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   0.38 
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    23   3.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -1

Query: 743 KCIQ-NNYFIXYCLVSLVLFHMLFXKCL**FSYHFLYFVP 627
           KC      +  YC+      H+LF  C   F+ H L++ P
Sbjct: 49  KCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCP 88



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 755 LFY*KCIQNNYFIXYCLVSLVLFHMLFXKCL**FSYHFLYF 633
           LF+  CI   YF  YC   +   H+LF  C+  F   F+ F
Sbjct: 140 LFFLLCIY--YF--YCAFIIFTVHLLFLLCIYHFFCAFIIF 176



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 725 YFIXYCLVSLVLFHMLFXKCL**FSYHFLY 636
           + +  C       H+LF  CL  F+ H L+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLDYFTLHLLF 208


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 566 WLTLVENFSSALKEIGDVENWARSIENDMKIITDTLXRAY 685
           +L L  N S+ L  +   + WA+ I+N +K++  T  +A+
Sbjct: 72  FLLLALNISTILTTVRKQQQWAQLIQN-LKVVATTKTKAW 110


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 185 EGS*EVTSLGFVLFSPICALLCTDI 111
           E S EVTS   ++ SP  +L  TDI
Sbjct: 13  ESSSEVTSSSALVMSPANSLASTDI 37


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 365 QAKQAAKRVVQEQKRKECITAANDLTQALVDHLN 466
           QA    +R+++ +KR EC    ND   ALV + N
Sbjct: 178 QADMPLERIIEAEKRVEC----NDPLVALVVNEN 207


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 445 LC*IISSCNALLTFLFLYNTFSCLFCLMFF 356
           LC + +S      FLF+ +TFS      ++
Sbjct: 224 LCQVANSIYGFQNFLFVLSTFSICITQFYY 253


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 529 PRCNKFFQTNTAMVDSCGKFQQC 597
           P CN     N  +  SC ++ QC
Sbjct: 154 PLCNDDPNGNVPLGKSCNRYWQC 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,836
Number of Sequences: 336
Number of extensions: 3123
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)