Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_G10
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30423-8|CAA83011.1|  129|Caenorhabditis elegans Hypothetical pr...   138   4e-33
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr...    32   0.39 
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch...    32   0.39 
Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF026202-1|AAZ82858.1|  755|Caenorhabditis elegans Histone deace...    30   2.1  
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    29   3.6  
L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeo...    28   8.3  
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z30423-8|CAA83011.1|  129|Caenorhabditis elegans Hypothetical
           protein T20G5.10 protein.
          Length = 129

 Score =  138 bits (334), Expect = 4e-33
 Identities = 66/111 (59%), Positives = 81/111 (72%)
 Frame = +2

Query: 356 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 535
           KEH  KQ  +R VQE+ + E I AA  L+ A+VDHLN  VAQAY NQK+LD EAK     
Sbjct: 3   KEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFENN 62

Query: 536 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLXRAYE 688
           +   +KQT+QWL + E  + ALKEIGDVENW+++IENDMKIIT+TL RAYE
Sbjct: 63  SAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113


>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
            K12F2.1 protein.
          Length = 1969

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 488  LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 667
            LN+     E K+ H   I  +K  QQ   L EN     +  GD+E   R +E D+K+  +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077

Query: 668  TL 673
             +
Sbjct: 1078 NI 1079


>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
            protein.
          Length = 1969

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 488  LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 667
            LN+     E K+ H   I  +K  QQ   L EN     +  GD+E   R +E D+K+  +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077

Query: 668  TL 673
             +
Sbjct: 1078 NI 1079


>Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical
           protein F13A7.7 protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 326 CLIIKQYEFKKDNYICTYHTI 264
           CLI K+YE + DN+ C Y  I
Sbjct: 163 CLIDKEYELQSDNFSCGYRVI 183


>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
            protein Y80D3A.2 protein.
          Length = 1467

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 494  QKKLDAEAKLLHQGAINFS-KQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDT 670
            ++ L+ E      G +N+  K+  Q L  VE  + ALK +GDV   A + EN       +
Sbjct: 887  EEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDV---AYTCENAGYFFRFS 943

Query: 671  LXRAYEKAQEKPSS 712
            + R +E+   K +S
Sbjct: 944  VCRVWEEFLAKVTS 957


>AF026202-1|AAZ82858.1|  755|Caenorhabditis elegans Histone
           deacetylase protein 4 protein.
          Length = 755

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 211 NETFSVDFLKDPEKLRLWGLFYFPPFVHFCAQILI 107
           N  FS D ++DPE L  W     P    FC   +I
Sbjct: 584 NVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFII 618


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
           protein C01B9.1b protein.
          Length = 1671

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 557 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 444
           F  ++  HLG+  ++ H ++F DL  L++H   +D+P +
Sbjct: 520 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 558


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
           protein C01B9.1a protein.
          Length = 1601

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 557 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 444
           F  ++  HLG+  ++ H ++F DL  L++H   +D+P +
Sbjct: 450 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 488


>L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeobox
           protein 26 protein.
          Length = 586

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 482 AYLNQ-KKLDAEAKLLHQGAINFSKQTQQWL-TLVENFSSALKEIGDVENWA 631
           A+L+Q +K  A A++LH G IN  +        LV NF   L+++  + +WA
Sbjct: 233 AFLDQQRKQVAAAQILHNGKINIERLVSSVKGDLVTNFMKDLEKV--IRDWA 282


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
           protein Y48G1C.5 protein.
          Length = 1161

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 530 QGAINFSKQTQQWLTLVENFSSALKEIGDVENW--ARSIENDMKIITDT 670
           Q  I    +  Q+ T V++      +IGD++ W    + + DMK ITD+
Sbjct: 114 QSNIGDDVEADQFFTTVKSVVHVAHDIGDLKKWPDETNFKADMKDITDS 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,208,447
Number of Sequences: 27780
Number of extensions: 285723
Number of successful extensions: 864
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)