Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_G04
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 43 3e-04
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 40 0.002
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 38 0.009
SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32) 36 0.027
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 33 0.33
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16) 32 0.44
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 32 0.44
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 31 0.76
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 31 0.76
SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 30 1.8
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 30 2.3
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 30 2.3
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_9725| Best HMM Match : GETHR (HMM E-Value=0.00026) 29 3.1
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 29 4.1
SB_55040| Best HMM Match : TatC (HMM E-Value=0.59) 29 4.1
SB_23868| Best HMM Match : Gal_Lectin (HMM E-Value=1.4e-05) 29 5.4
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.4
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 29 5.4
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 29 5.4
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 28 7.1
SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_7082| Best HMM Match : FGF (HMM E-Value=2.8e-22) 28 7.1
SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95) 28 9.4
SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95) 28 9.4
SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 28 9.4
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 28 9.4
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +1
Query: 295 LMEEHGESKDRVQRAPFETALHHAGYGCFQWLLLLSCGAVYAVCALSTTTLSFVLPATKN 474
++ E E +D+ E A+ GYG FQ LLL G + ++ T L+ + PA +
Sbjct: 36 ILVEDQEKEDKELTYTVEDAIDRLGYGLFQIKLLLMIGFAWMADSMEITILAIMCPAIRC 95
Query: 475 DFELSSSDKGRLTATPLIGMC 537
++ LS+ + +T L+ C
Sbjct: 96 EWNLSTWAEALITTVTLLMRC 116
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/78 (32%), Positives = 34/78 (43%)
Frame = +1
Query: 508 LTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSG 687
L + IGM GS+ G ++DA GRK S++V S F RF G
Sbjct: 113 LQSVYFIGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLRFLVG 172
Query: 688 FGIIGATGLIFPYFGDFL 741
FG+ GA F Y + +
Sbjct: 173 FGLSGAMLSQFIYLTEIV 190
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 37.9 bits (84), Expect = 0.009
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +1
Query: 388 LLLLSCGAVYAVCALSTTTLSFVLPATKNDFELSSSDKGRLTATP----LIGMCVGSYFW 555
+L++ GA +A + T + AT N ++L D+G L AT +GM +GS
Sbjct: 38 VLVMPMGAQFAALIFAMGTPHYHC-ATPN-WKLIC-DRGYLGATLQSCFFVGMLIGSLVC 94
Query: 556 GNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGIIGATGLIFPYFGD 735
G ++DA GRK S+ V S F RF GFG+ G + Y +
Sbjct: 95 GVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFFAFLRFVVGFGLTGVMLSEYVYLAE 154
Query: 736 FL 741
+
Sbjct: 155 MV 156
>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
Length = 943
Score = 36.3 bits (80), Expect = 0.027
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Frame = -1
Query: 753 VPQRQKVTEVREDEARGSDDSEPGE--EPASQEPREGLHNAGQERGQSIQK*SSNDGDLS 580
V + +K E +EDE + D +PG+ P + EG + R + D+
Sbjct: 98 VKKSKKNKEKKEDEDAENADQQPGDASHPPGTDGTEGGQGRDEVRKAILDIPGEGGSDMK 157
Query: 579 ASSVRQVTPEVRADAHSDERRGGEAALVGGRQLEVILGGGQHEAERGRAECADGVHGAAG 400
+ R+V E R +A + G + GG Q G G E RGR E A G G
Sbjct: 158 SRLQREV-QEARRNAVKTDEEEGASGREGGEQ---EAGKGGLEGARGRQEGAKVGEGVDG 213
Query: 399 QQ 394
+
Sbjct: 214 SR 215
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = -2
Query: 683 EKNLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQKYEP 540
E+ LQARN E L RNA++ KSR+ + RP KLPQ P
Sbjct: 1093 EQELQARNAEA-AEKLPRNASQHDKSRSSNSVVGRP-LRTKLPQTAVP 1138
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -1
Query: 741 QKVTEVREDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQ 562
+K +VR+D AR DSE G + E R+ + + S + N D+SA +Q
Sbjct: 86 KKAGKVRDDRARKGSDSEGGSDERKCEDRKDKTRKKKRKHDSSEDSDDNSSDVSAKK-KQ 144
Query: 561 VTPEVRADAH 532
E + H
Sbjct: 145 CKEERKRKRH 154
>SB_59709| Best HMM Match : p450 (HMM E-Value=8e-16)
Length = 377
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/79 (25%), Positives = 31/79 (39%)
Frame = -2
Query: 731 PK*GKMRPVAPMIPNPEKNLQARNPEKDCTTLDRNAARASKSRAPMMAIFRPRASAKLPQ 552
P+ G R A + P P L R +++CT + R P+ + R A + P
Sbjct: 234 PRSGNQRKPASVPPPPPGYLIIRRCDEECTIRGVHFPRGVDVNIPVYILHRDPAVWERPD 293
Query: 551 KYEPTHIPMSGVAVRRPLS 495
++P H R P S
Sbjct: 294 DFDPEHFSHEANEKRHPYS 312
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +1
Query: 508 LTATPLIGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSG 687
L A GM +GS GNL+D GRK SS V S F RF G
Sbjct: 104 LQACDFSGMVLGSLISGNLSDRLGRKKWCLYSAIILLISSTSSSFVDCPSFFAFLRFVVG 163
Query: 688 FGII 699
I
Sbjct: 164 MSTI 167
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -2
Query: 722 GKMRPVAPMIPNPEKNLQARNPEKDCTTLDRNAA--RASKSRAPMMAIFRPRASAKLPQK 549
GKM+ AP PE + PE D NA+ +ASK++ M +P+ +
Sbjct: 233 GKMKARAPSARQPETKINM--PEGDAHISGPNASVPKASKAKGGMSCCSKPKTKGDMNYS 290
Query: 548 YEPTHIPMSGVAVRRP 501
YE + G ++ P
Sbjct: 291 YEMEPVEYKGRDLKGP 306
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 526 IGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 696
+G GS G L+DA GRK +S V S + + FF+G I
Sbjct: 63 VGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAGLSI 119
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 31.5 bits (68), Expect = 0.76
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Frame = +1
Query: 424 CALSTTTLSFVLPATK--NDFELSSSDKGRLTATPLI---GMCVGSYFWGNLADARGRKX 588
C++ + F P T +++L AT I G G+ +G L+D GR+
Sbjct: 63 CSIPRSEWEFTTPYTSIVTEWDLVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRK 122
Query: 589 XXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGIIGATGLIFPYFGDFL 741
SS V + + RFF GFG+ G+ ++F +F+
Sbjct: 123 VLFISSCMVCWVAFASSFVPYYWLYAVFRFFIGFGLGGSIVILFIMATEFV 173
>SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 729 EVREDEARGSDDSEPG--EEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVT 556
E +D+A+ ++ E G E+P++++PR + S S +D D S+SS +
Sbjct: 80 EANDDQAQPGNEVEKGATEDPSAKKPRTDAEGSSDSDSDSSDS-SGSDDDSSSSSSSSSS 138
Query: 555 PEVRADAHSDERRGGEAALVGGRQLEVILGG 463
+ +D A RQ L G
Sbjct: 139 SSSSSSEETDNETEQPATPAPSRQKPTSLNG 169
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = -2
Query: 719 KMRPVAPMIPNPEKNLQARNPEKD---CTTLDRNAARASKSRAPMMAIFRPRASAKLPQK 549
K+ P+ P P+KN+ + KD T+ D+ ++++ P + A ++
Sbjct: 1197 KLAPIFLQRPKPQKNVTPASTSKDQTEATSTDKLKQKSAEVIRPEIPAVNQEELAAANKE 1256
Query: 548 YEPTHIPMSGVAVRRPLSE 492
P + P+S V++ LS+
Sbjct: 1257 QVPQYEPLSSAMVKKVLSD 1275
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 632 RNAARASKSRAPMMAIFRPRASAKLPQKYEPTHIPMSGVAVRRPLSEDDSSKSFLVAGST 453
+NAA++ S A+ P +S +L P+H SG + P S+D+SS ++
Sbjct: 427 QNAAKSYTSSMHTNAVLSPTSSEELRSTASPSH--QSGSSSPTPTSQDESSDKKILQAKA 484
Query: 452 K 450
K
Sbjct: 485 K 485
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 526 IGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 696
+G GS+ G ++DA GRK +S V S + FF+G +
Sbjct: 154 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAGLSL 210
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -1
Query: 741 QKVTEVREDEARGSDDSEPGEEPASQEPREGLHNAGQ------ERGQSIQK*SSNDGDLS 580
+++TE E+E ++ + EE +E EG G+ ERG S K S++ D S
Sbjct: 33 RQITEEEEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDERGISSSKDESDESDES 92
Query: 579 ASS 571
S
Sbjct: 93 NES 95
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 526 IGMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGI 696
+G GS+ G ++DA GRK +S V S + FF+G +
Sbjct: 157 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSL 213
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = -1
Query: 732 TEVREDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTP 553
T V ED++ GSDDS+ A + + + E G +D + SA S Q
Sbjct: 137 TRVEEDKSAGSDDSDDEYSEADSQSDDDDVQSASEEGSGAGTGCESDNESSAESEDQGEW 196
Query: 552 EVRADAHSDERRGGEAALV 496
+ +D + G+ ++
Sbjct: 197 ASAEEDGADTKDSGDEKVI 215
>SB_9725| Best HMM Match : GETHR (HMM E-Value=0.00026)
Length = 338
Score = 29.5 bits (63), Expect = 3.1
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Frame = -1
Query: 729 EVREDEARGSDDSEPGEEPASQEPREG-LHNAGQER-GQSIQK*SSNDGD-LSASSVRQ- 562
EVR+ E S + GE S E R+G +G+ R G++ G+ ++ VRQ
Sbjct: 63 EVRQGETFTSGEVRQGETFTSGEVRQGETFTSGEVRQGETFTSGEVRQGETFTSGEVRQG 122
Query: 561 ---VTPEVRADA--HSDERRGGEAALVGGRQLEVILGGGQHEAERGRAECADGVHGAAGQ 397
+ EVR S E R GE G + G+ + RG + G HG A
Sbjct: 123 ETFTSGEVRQGETFASGEVRQGETFTSGEVRQGETFTTGEEQKGRGVITTSAGNHGLALA 182
Query: 396 QQ 391
QQ
Sbjct: 183 QQ 184
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +1
Query: 418 AVCALSTTTLSFVLPATKNDFELSSSDKGRLT-ATPLIGMCVGSYFWGNLADARGRKXXX 594
A C T F T+ D + + LT A + G+ VGS + ++D GR+
Sbjct: 90 ANCTSYTYHGEFTSAVTQWDLICNRAHLKALTQAMYMAGLLVGSLVFSAVSDRFGRRIGV 149
Query: 595 XXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGIIGATGLIFPYFGDFLSLRH 753
S S F+ RF +G G + + + + +S+ H
Sbjct: 150 FISIALLAVCGTTSGFSNCLSLFILLRFVTGMANAGCLLVRYVFCMELISINH 202
>SB_55040| Best HMM Match : TatC (HMM E-Value=0.59)
Length = 275
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +1
Query: 529 GMCVGSYFWGNLADARGRKXXXXXXXXXXXXXXXXSSVVQSFSGFLACRFFSGFGIIGA 705
GM +GS G ++DA GRK V S F RF G G GA
Sbjct: 121 GMLIGSLVSGLISDAWGRKKCFYLSYALMVVAGVSCVFVDCISFFAFLRFVVGAGTAGA 179
>SB_23868| Best HMM Match : Gal_Lectin (HMM E-Value=1.4e-05)
Length = 318
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +1
Query: 43 APRDRTHVQSRRDIHSSINAVKISFASQIKVLISYILSINTNGIKRTDKQSVSRP 207
A +D TH +SR+D+ + + ++ ++K L + T G+ T + +++ P
Sbjct: 166 AKKDETHTESRQDMGLQLRVLVVTHTVRVKTLQEVAM---TQGLTTTPEATITPP 217
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 548 YEPTHIPMSGVAVRRPLSEDDSSKSFLVAGSTK 450
Y+P + P SG R + EDD+S++ L + K
Sbjct: 728 YQPNNEPFSGEIFSRYICEDDTSRTLLESSKRK 760
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 741 QKVTEVREDEARGSDDSEPGEEPASQEPREGLHNA 637
+++ E + S++SEP EEP +Q P E + A
Sbjct: 1655 EQIEPEEEPVTQTSEESEPEEEPMTQIPEESMSEA 1689
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Frame = -1
Query: 744 RQKVTEVREDEARGSDDSE--------PGEEPASQEPREGLHNAGQERGQSIQK*SSNDG 589
+QK EV++DE +D++E ++P +P AG + QK S
Sbjct: 258 KQKAKEVKKDEKDSNDEAEDDSDDDNSEDDQPLDSKPESQEEKAGHHDKKMKQKKSLKHS 317
Query: 588 DLSASSVRQVTPEVRADAHSDERRGGEAA 502
SS R++T E A E A
Sbjct: 318 VSIESSYRRITLEKCKKAKESREEAAELA 346
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -1
Query: 720 EDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTPE 550
+D+ G D+ +PA EP+ +N G++ S S D ++ + Q+ E
Sbjct: 17 DDDDEGMLDASSSSDPAVNEPQISTNNTGRDSNCSDSSTSPKDSNVDMTEQMQLMAE 73
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 424 CALSTTTLSFVLPATKNDFELSS-SDKG----RLTATPLIGMCVGSYFWGNLADARGRK 585
C + T+ FV P T + E + D+G L A GM +GS G +ADA GRK
Sbjct: 270 CCDNCTSYEFVGPFTTSVSEWNLICDRGYIGASLQAVFFAGMMIGSVISGMMADAWGRK 328
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 61 HVQSRRDIHS--SINAVKISFASQIKVLISYILSINTNGIKRTDKQSVSRPLREILSLCD 234
H++ R H S N +I F+SQI ++ + + + RT V+R LR + CD
Sbjct: 212 HLEDRITFHQQPSKNKPEIIFSSQISLIDALNAAAQSKSDSRTYLIDVARYLRSEIKKCD 271
Query: 235 -ISCKLQFVN 261
IS K VN
Sbjct: 272 GISFKPLNVN 281
>SB_11681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Frame = -1
Query: 720 EDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTPEVRA 541
E++A G D + A + +G+ A + + I + DG + + E +A
Sbjct: 291 EEKADGIADGTKADGMADETKADGM--AKETKADGIADLTKADGIADVTKAHGMADETKA 348
Query: 540 DAHSDERRGGEAA--------LVGGRQLEVILGGGQHE 451
D +DE + E A ++ G + + +L G +H+
Sbjct: 349 DEMADETKADEMADETKADGIVIDGTKADGVLDGTKHD 386
>SB_19551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -1
Query: 744 RQKVTEVREDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVR 565
R++ E ++E R + + E E+P+ +EP E H ++ + + ND D ++
Sbjct: 148 REREEEEAKEEERETTEEEEVEKPSDEEPLETTHGRLPKKIALVDL-TGNDSDEEENNTH 206
Query: 564 QVTPE 550
Q E
Sbjct: 207 QEEEE 211
>SB_7082| Best HMM Match : FGF (HMM E-Value=2.8e-22)
Length = 260
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 539 THIPMSGVAVRRPLSEDDSSKSF 471
T PMSGV+ R SED+SS SF
Sbjct: 183 TPSPMSGVSQRSSQSEDESSGSF 205
>SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 1037
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 49 RDRTHVQSRRDIHS--SINAVKISFASQIKVLISYILSINTNGIKRTDKQSVSRPLREIL 222
R + H + R H S N +I F+SQI ++ + + + +T V+R LR +
Sbjct: 199 RLKHHFEDRISFHQQPSNNKPEIIFSSQISLIDALCAAAQSKSDSKTYLIDVARYLRSEI 258
Query: 223 SLCD-ISCKLQFVN 261
CD IS K VN
Sbjct: 259 KKCDGISFKPLNVN 272
>SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 710
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 49 RDRTHVQSRRDIHS--SINAVKISFASQIKVLISYILSINTNGIKRTDKQSVSRPLREIL 222
R + H + R H S N +I F+SQI ++ + + + +T V+R LR +
Sbjct: 210 RLKHHFEDRISFHQQPSNNKPEIIFSSQISLIDALCAAAQSKSDSKTYLIDVARYLRSEI 269
Query: 223 SLCD-ISCKLQFVN 261
CD IS K VN
Sbjct: 270 KKCDGISFKPLNVN 283
>SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/91 (27%), Positives = 35/91 (38%)
Frame = -1
Query: 678 EPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTPEVRADAHSDERRGGEAAL 499
E + P EG+ +E Q+ N+G + R A S E RGG +
Sbjct: 119 ESVTSIPDEGMMIISEENLPLEQEDGYNNGSTQTRRDGVSSSSSRKSAQSSENRGG---V 175
Query: 498 VGGRQLEVILGGGQHEAERGRAECADGVHGA 406
V R LE + RG E + VHG+
Sbjct: 176 VVERALETVSSN-----NRGHRESTESVHGS 201
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 747 QRQKVTEVREDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASS 571
+ ++ TE E++ ++ E EE ++ E + ERG S K SN+ D S S
Sbjct: 94 EEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEV--VTDERGISSSKDESNESDESNES 150
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -1
Query: 729 EVREDEARGSDDSEPGEEPASQEPREGLHNAGQERGQSIQK*SSNDGDLSASSVRQVTPE 550
E+++ E+RG D + G+E +E N G +GQ S ND D+ S
Sbjct: 214 ELKDSESRGRSDEDSGDE------KESGKNEGSYKGQGD---SENDQDMDQDSTSSKQKV 264
Query: 549 VRADAHSDE 523
AD ++
Sbjct: 265 SHADLFGED 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,998,717
Number of Sequences: 59808
Number of extensions: 439150
Number of successful extensions: 1451
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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