Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_G01
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70682-6|CAH60781.2|  401|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF016415-6|AAB65267.1|  283|Caenorhabditis elegans Lysozyme prot...    29   3.1  
AC024763-7|AAF60517.1|  304|Caenorhabditis elegans Pdgf/vegf gro...    28   7.1  
AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical...    28   9.3  
AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z70682-6|CAH60781.2|  401|Caenorhabditis elegans Hypothetical
           protein F08G5.7 protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 598 RFCSRXITSFLTPCPIIAASTDTKTSRLTVSPLLSSITKA 479
           ++C R  TS  T  P    +   KTS  TV+P   + TKA
Sbjct: 199 KYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKA 238


>AF016415-6|AAB65267.1|  283|Caenorhabditis elegans Lysozyme protein
           7 protein.
          Length = 283

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +3

Query: 339 ACVTAADALRVGAGIXDVTGPPAEIAFMGYAQLEQIGHGIHLRQFS-RAFVIEDNS 503
           +CVT  +A + G GI     P       GY QL++I  G+  R  + RA  I+  S
Sbjct: 96  SCVTIQNAYKAGLGIEIYMTPQPVSNKQGYQQLDEIIQGLTARAITVRAIWIQVTS 151


>AC024763-7|AAF60517.1|  304|Caenorhabditis elegans Pdgf/vegf growth
           factor relatedprotein 1 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +3

Query: 24  ELCCR*HVXCALIISSSXTPAYFPY*RLSELCISYCANCKTRQNC 158
           E+    H  C+     S TP   P   +   C   CAN + R NC
Sbjct: 185 EITMEEHTSCSCFDCGSNTPQCAPGFVVGRSCTCECANKEERNNC 229


>AL117195-28|CAB55014.1|  458|Caenorhabditis elegans Hypothetical
           protein Y57A10A.11 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 465 AGEFHARSARVEHSP*KQFQPV-GQ*RQXCQPRHAAHPPPSRTQARTT 325
           AG  ++       +P K   PV G+ ++   P  A  PPP +T+A TT
Sbjct: 82  AGYEYSNDETTPFAPPKFGYPVVGEAKEEANPYDAPAPPPPKTEAPTT 129


>AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical
           protein K09D9.11 protein.
          Length = 861

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 632 HQRHPHSLHSWRIPDGFPLRSAHPWIRE 715
           +Q+H        +P  FP+ S H WI E
Sbjct: 618 YQKHSKKAFRMNVPQKFPVSSFHIWIEE 645


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,494,900
Number of Sequences: 27780
Number of extensions: 355984
Number of successful extensions: 908
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)