Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F24
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n...    35   0.61 
UniRef50_P82295 Cluster: Prominin-like protein; n=2; Sophophora|...    33   1.9  
UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella ve...    33   2.5  
UniRef50_A7TTK9 Cluster: Putative uncharacterized protein; n=1; ...    32   5.7  
UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules an...    31   9.9  
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr...    31   9.9  

>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
           Rattus norvegicus
          Length = 294

 Score = 35.1 bits (77), Expect = 0.61
 Identities = 16/67 (23%), Positives = 30/67 (44%)
 Frame = +2

Query: 14  HFENNTWSYESTLINMFKFLAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIF 193
           H +   + +    I +  F+  R   CVC   ++ + V  C+H   C C+    CV C++
Sbjct: 101 HRDERCFVHLQNYIYLLCFVYARLCVCVCVCVSYHLEVTLCIHLGVCMCVCVCVCV-CVY 159

Query: 194 RLLTSWL 214
             +  W+
Sbjct: 160 VCVCMWV 166


>UniRef50_P82295 Cluster: Prominin-like protein; n=2;
           Sophophora|Rep: Prominin-like protein - Drosophila
           melanogaster (Fruit fly)
          Length = 1013

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +2

Query: 50  LINMFKFLAVRCYSCVCCRKAFGV*VPSCLHRPSCRCIYFTCCVLCIFRLLTSWLF 217
           LI +  F+AV CY C CC +      P C  +   +  +  CC +C+  L+   +F
Sbjct: 176 LIIVIPFIAV-CYCCFCCCRRCRQGCPPCTSKQDAQRRF--CCGICLLILIIGLIF 228


>UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 242

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +2

Query: 158 CIYFTCCVLCIFRLLTSWLFCLHL-----LGPIHLLRSLIDNQKAILNA 289
           C+Y  C   C+F     WL C+ L      G + L+ S+ + Q+  LNA
Sbjct: 147 CVYLPCIAFCLFLFRKIWLLCISLGLNGVGGSLILIPSVPEMQRCCLNA 195


>UniRef50_A7TTK9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 647

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 321 LVSVSHNRNSIAFKIAFW-LSISERSKCMGPSRCRQNSQEVSRRNMQSTQQV 169
           L S+++ RNSI+  I FW LS S  SK    ++ R  S+  SR N++S  ++
Sbjct: 226 LKSLTNQRNSISHSIDFWNLSNSNNSKLKTKAKSRLRSK--SRPNLRSQSKI 275


>UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules and
            related proteins; n=3; cellular organisms|Rep: COG3321:
            Polyketide synthase modules and related proteins -
            Ostreococcus tauri
          Length = 11541

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +2

Query: 128  PSCLHRPSCRCIYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAIL--NAIEFR 301
            P+C  R  C  I++     C   +LT+++     +  IH+LR L DNQ   +  NA +  
Sbjct: 1800 PACPPRKVCFSIFYVKYSECTAGILTNFVRKPTSISRIHILRRLRDNQNKQIHPNAFKSP 1859

Query: 302  LC 307
            +C
Sbjct: 1860 IC 1861


>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
           alga; n=1; Ostreococcus tauri|Rep: T08009 probable
           ribosomal protein L5-green alga - Ostreococcus tauri
          Length = 331

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 240 MGPSRCRQNSQEVSRRNM-QSTQQVKYMQRQLGRCR 136
           MG  R ++ SQ V++    QS  QVK+ +R+LG C+
Sbjct: 1   MGKRRQKRKSQSVAKTTAYQSRYQVKFARRRLGACK 36


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,467,873
Number of Sequences: 1657284
Number of extensions: 4337677
Number of successful extensions: 11950
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11934
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)