Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F18
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 250 7e-67
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 245 3e-65
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 68 7e-12
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 68 7e-12
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 68 7e-12
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 64 7e-11
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 64 7e-11
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 64 9e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 64 9e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 60 2e-09
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 60 2e-09
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 58 8e-09
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 58 8e-09
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 46 2e-05
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 46 2e-05
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 3.0
Z93377-11|CAM84803.1| 332|Caenorhabditis elegans Hypothetical p... 28 7.0
Z81513-15|CAM84808.1| 332|Caenorhabditis elegans Hypothetical p... 28 7.0
Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80842-10|AAB37944.1| 204|Caenorhabditis elegans Hypothetical p... 27 9.2
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 250 bits (612), Expect = 7e-67
Identities = 128/181 (70%), Positives = 146/181 (80%)
Frame = +1
Query: 130 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 309
MLRL R QT + R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNV
Sbjct: 1 MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53
Query: 310 ILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARA 489
I+EQSWGSPKITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVLARA
Sbjct: 54 IIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARA 113
Query: 490 IAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSKPVTTPEEIAQVXTISANGDTAI 669
IAKEGFE I +G N +EIRRGVM AV V +LK +SK VTTPEEIAQV TISANGDT +
Sbjct: 114 IAKEGFESIRQGGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVV 173
Query: 670 G 672
G
Sbjct: 174 G 174
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 245 bits (599), Expect = 3e-65
Identities = 126/181 (69%), Positives = 144/181 (79%)
Frame = +1
Query: 130 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 309
MLRL R QT + R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNV
Sbjct: 1 MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53
Query: 310 ILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARA 489
I+EQSWGSPKITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVL RA
Sbjct: 54 IIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRA 113
Query: 490 IAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSKPVTTPEEIAQVXTISANGDTAI 669
IAKEGFE+ S N +EIRRGVM AV V +LK +SK VTTPEEIAQV TISANGDT +
Sbjct: 114 IAKEGFERHSSRGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVV 173
Query: 670 G 672
G
Sbjct: 174 G 174
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 184 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 351
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 352 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 531
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 532 PIEIRRGVMLAVXAVKEKLKGMS 600
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 184 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 351
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 352 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 531
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 532 PIEIRRGVMLAVXAVKEKLKGMS 600
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 7e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 184 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 351
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 352 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 531
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 532 PIEIRRGVMLAVXAVKEKLKGMS 600
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 64.5 bits (150), Expect = 7e-11
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Frame = +1
Query: 262 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 441
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 442 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSK--PVTT 615
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 616 PEEIAQVXTIS 648
E + + S
Sbjct: 161 RERLVETAQTS 171
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 64.5 bits (150), Expect = 7e-11
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Frame = +1
Query: 262 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 441
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 442 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSK--PVTT 615
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 616 PEEIAQVXTIS 648
E + + S
Sbjct: 161 RERLVETAQTS 171
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 64.5 bits (150), Expect = 7e-11
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Frame = +1
Query: 262 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 441
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 442 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSK--PVTT 615
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 616 PEEIAQVXTIS 648
E + + S
Sbjct: 161 RERLVETAQTS 171
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 64.1 bits (149), Expect = 9e-11
Identities = 41/135 (30%), Positives = 64/135 (47%)
Frame = +1
Query: 205 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 384
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 385 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 564
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 565 VXAVKEKLKGMSKPV 609
++ L MS PV
Sbjct: 140 AAEAEKILDEMSSPV 154
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 64.1 bits (149), Expect = 9e-11
Identities = 41/135 (30%), Positives = 64/135 (47%)
Frame = +1
Query: 205 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 384
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 385 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 564
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 565 VXAVKEKLKGMSKPV 609
++ L MS PV
Sbjct: 140 AAEAEKILDEMSSPV 154
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVK 579
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 580 EKLKGMSKPVT-TPEEIAQVXTISA 651
E +K +S+ ++ T + I + ++A
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNA 155
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVK 579
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 580 EKLKGMSKPVT-TPEEIAQVXTISA 651
E +K +S+ ++ T + I + ++A
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNA 155
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/131 (25%), Positives = 65/131 (49%)
Frame = +1
Query: 244 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 423
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 424 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSK 603
+A + + E GDGTT+ VLA I K+ I G +P + R + A + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 604 PVTTPEEIAQV 636
+ E+ ++
Sbjct: 142 KINGETELREM 152
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 57.6 bits (133), Expect = 8e-09
Identities = 33/131 (25%), Positives = 65/131 (49%)
Frame = +1
Query: 244 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 423
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 424 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGMSK 603
+A + + E GDGTT+ VLA I K+ I G +P + R + A + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 604 PVTTPEEIAQV 636
+ E+ ++
Sbjct: 142 KINGETELREM 152
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/130 (23%), Positives = 56/130 (43%)
Frame = +1
Query: 238 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 417
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 418 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGM 597
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 598 SKPVTTPEEI 627
K ++
Sbjct: 138 KKEAPVERDL 147
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/130 (23%), Positives = 56/130 (43%)
Frame = +1
Query: 238 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 417
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 418 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVXAVKEKLKGM 597
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 598 SKPVTTPEEI 627
K ++
Sbjct: 138 KKEAPVERDL 147
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G V+ + +AD + ++GP+ +L G +T DG + + + +K
Sbjct: 21 GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHP--- 77
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANP---IEIRRGVMLAVX 570
AK + +A +EE GDGTT+ +LA + + + +P I+ R + +
Sbjct: 78 -AAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMI 136
Query: 571 AVKEKLKGMSKPVTTPEEIAQV 636
E + +T EIA+V
Sbjct: 137 QWSENKFSKTVDITDDAEIAKV 158
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 386 SLSSTPLATVTPSFVIFGDPQDCSRITFLPFGPIVTATASARMST 252
S + P TVTP V + D + +P PIVT T +A ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654
>Z93377-11|CAM84803.1| 332|Caenorhabditis elegans Hypothetical
protein F13A7.14 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 455 TELPLPQYWHEQSRRRASKKYQRVLTRLR*E 547
T+ L ++ HE+SRR+ +K +RV R+ E
Sbjct: 102 TQFTLQKWEHEESRRQEKRKRKRVAERIERE 132
>Z81513-15|CAM84808.1| 332|Caenorhabditis elegans Hypothetical
protein F13A7.14 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 455 TELPLPQYWHEQSRRRASKKYQRVLTRLR*E 547
T+ L ++ HE+SRR+ +K +RV R+ E
Sbjct: 102 TQFTLQKWEHEESRRQEKRKRKRVAERIERE 132
>Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.6 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 235 LLHQRQTSHLWHKILKVDMIYGEKQFDEQH 146
L+HQ ++S W + LK+ +I EKQ + H
Sbjct: 292 LVHQIRSSR-WRRALKIKVIKNEKQTQDDH 320
>Z77668-1|CAB01239.1| 576|Caenorhabditis elegans Hypothetical
protein R11G10.2 protein.
Length = 576
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 304 NVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKL 414
N+++ WG P++ +DG + EL++ ++ GA+L
Sbjct: 259 NLMISSEWGHPRLLRDGFMPS---ELENVSESFGARL 292
>U80842-10|AAB37944.1| 204|Caenorhabditis elegans Hypothetical
protein ZC239.5 protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 166 KQFDEQHEVDAT-FLKIVLILAVFQLRSKLLQTLFLEDSSRVRK 38
+Q+ EQ + +T F KIVLIL ++ L L+Q F SR +K
Sbjct: 159 EQYAEQEDTPSTMFWKIVLILCIYILCEYLVQK-FRPQKSRQQK 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,688,597
Number of Sequences: 27780
Number of extensions: 292646
Number of successful extensions: 894
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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