Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F17
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    96   2e-20
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    75   3e-14
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    50   2e-06
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    44   7e-05
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    38   0.006
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    32   0.39 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    29   2.7  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 88  FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWHXLAG 267
           FD AAA VK LK  P++ +LL LYA FKQ TVGD +  + PG+ DLKGKAK+ AW    G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 268 XSKEDAQKAYIEIVEGLIASIG 333
            +K+DAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 36/86 (41%), Positives = 54/86 (62%)
 Frame = +1

Query: 67  NMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFD 246
           + S Q  F++A  N+K LK  P +   L LY  FKQAT GD      PG++D  G+AK+D
Sbjct: 22  SFSAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYD 80

Query: 247 AWHXLAGXSKEDAQKAYIEIVEGLIA 324
           AW+ L G ++++A+  Y ++V GLI+
Sbjct: 81  AWNTLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = +1

Query: 70  MSLQEKFDQAAANVKNL-KALP---TDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKA 237
           MSLQEKFD A   ++ L K  P   ++ Q L  Y+ FKQA++GD +  + PG+  +  + 
Sbjct: 1   MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERK 59

Query: 238 KFDAWHXLAGXSKEDAQKAYIEIVEGLIASI 330
           K+D+W  L G S+++A++ YI+ +  +   I
Sbjct: 60  KWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = +1

Query: 88  FDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDA--DPANXPGLLDLKGKAKFDAWHXL 261
           F+ AA  ++ LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 262 AGXSKEDAQKAYIEIVEGLIASIG 333
            G + E  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = +1

Query: 148 LNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWHXLAGXSKEDAQKAYIEIVEGLIAS 327
           LN YA FKQAT G  D    P   D++G  K++AW+ L   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCDLPK-PSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 328 IGLKE*KT 351
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 25/88 (28%), Positives = 39/88 (44%)
 Frame = +1

Query: 64  INMSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKF 243
           I+  L+ KFD A   +           +L  Y  +KQA  G AD    P   +   + KF
Sbjct: 24  IDTLLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKF 83

Query: 244 DAWHXLAGXSKEDAQKAYIEIVEGLIAS 327
           ++W   +  S+  A +AY E++  L  S
Sbjct: 84  NSWLANSQMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +1

Query: 73  SLQEKFDQAAANVKNL-KALPTDAQL---LNLYAHFKQATVGDADPANXPGLLDLKGKAK 240
           SL E+F+ A   +  L K  P    +   L +Y+ +KQAT G  D    P    ++ + K
Sbjct: 4   SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQ-PYFFQIEQRMK 62

Query: 241 FDAWHXLAGXSKEDAQKAYIE 303
           ++AW+ L    + +A+  Y+E
Sbjct: 63  WNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 223 LKGKAKFDAWHXLAGXSKEDAQKAYIEIVEGL 318
           + G  K+ AW+   G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 148 LNLYAHFKQATVGD-ADPANXPGLLDLKGKAKFDAWHXLAGXSKEDAQKAYIEIVE 312
           + L +  KQ   G+ +D  +  G LD+ G     AW  L   S+++A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,511
Number of Sequences: 27780
Number of extensions: 223775
Number of successful extensions: 486
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)