Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_F16
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   0.87 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   3.5  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 18/71 (25%), Positives = 33/71 (46%)
 Frame = +1

Query: 175 VLAVVAMVNSLTMDREATEELIAAASSARDRGEVAILVRGPHGKSARREELLHAKSEDDV 354
           +LAV A   S+        E  +AA  + D   +  LVR  + K +   E+   ++++ +
Sbjct: 363 ILAVTAEELSVYEQLSRLVEGSSAAKLSNDSSNIVSLVRDQYNKISSSVEMKDNRTDNVI 422

Query: 355 SISLYYNRKTN 387
            +  YY+R  N
Sbjct: 423 DVK-YYSRCRN 432


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 53  ALRMQFLLTEKKIAGF*IGGNKVISN-NATW 142
           ALR+Q +  +K+I  F IGGN  + + N  W
Sbjct: 694 ALRLQPVPEDKQIPEFYIGGNPFVCDCNIDW 724


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +1

Query: 139 MAIPAMCARIFSVLAVVAMVNSL--TMDREATEELIAAAS 252
           +AI ++CA +F+++A+   +N L   M ++AT  L  AAS
Sbjct: 164 VAILSICASVFTLMAIAIDMNPLKPRMGKKAT--LCVAAS 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,402
Number of Sequences: 2352
Number of extensions: 13862
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)