Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_F14
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 59 5e-10
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 53 3e-08
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 43 3e-05
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 41 1e-04
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 36 0.004
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 35 0.012
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 33 0.027
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 33 0.047
SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 27 1.8
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 27 3.1
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 3.1
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 27 3.1
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 26 4.1
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 4.1
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 7.2
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 7.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.2
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 25 7.2
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.5
SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 9.5
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 59.3 bits (137), Expect = 5e-10
Identities = 35/105 (33%), Positives = 50/105 (47%)
Frame = +3
Query: 3 LFAAIAQGALXEFSNILTQHKGXVNFFDENGMTALQHAAYKGNKDMVQLLLDRGADVNSG 182
LF A +QG L N+++ K VN DE G TAL AA + + LL+ GADVN+
Sbjct: 4 LFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAI 63
Query: 183 KHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTSAQMA 317
+ +H+ A GS + L+ GA P + G +A
Sbjct: 64 GGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLA 108
Score = 39.5 bits (88), Expect = 4e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 72 VNFFDENGMTALQHAAYKGNKDMVQLLLDRGADVNSGKHEYNYTALHFGALSGSSEVCKL 251
V+ D+ T L A+Y GN+ + LL GADV E T LH+ + G+ + KL
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGADV-LATDEDKMTPLHWSIVGGNLKCMKL 185
Query: 252 LLDAGAKP 275
+L G P
Sbjct: 186 ILKEGGIP 193
Score = 35.9 bits (79), Expect = 0.005
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 96 MTALQHAAYKGNKDMVQ-LLLDRGADVNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAK 272
M +L AA +G D V+ L+ DVN+ E TALH+ AL+ +CK LL+ GA
Sbjct: 1 MGSLFLAASQGELDTVKNLISSEKIDVNA-TDEGGATALHWAALNQQIPICKFLLEHGAD 59
Query: 273 PTA 281
A
Sbjct: 60 VNA 62
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +3
Query: 84 DENGMTALQHAAYKGNKDMVQLLLDR-GADVNSGKHEYNYTALHFGALSGSSEVCKLLLD 260
DENG + L A+ G+ +VQ ++ +V + ++E TA+H+ AL+G +E+CKLLL+
Sbjct: 33 DENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLE 92
Query: 261 AGAKPTATN 287
AG P N
Sbjct: 93 AGGDPHIKN 101
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 LFAAIAQGALXEFSNILTQ-HKGXVNFFDENGMTALQHAAYKGNKDMVQLLLDRGADVNS 179
L A A G + I+ +K +N +E+G TA+ AA G+ ++ +LLL+ G D +
Sbjct: 40 LHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHI 99
Query: 180 GKHEYNYTALHFGALSGSSEVCKLLLD 260
K+ Y + ++ + +V L LD
Sbjct: 100 -KNIYEKSPIYEADIRNQQKVMDLFLD 125
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 43.2 bits (97), Expect = 3e-05
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3
Query: 54 TQHKGXVNFFDENGMTALQHAAYKGNKDMVQLLLDRGADVNSGKHEYNYTALHFGALSGS 233
T + + +E+G + L A G + L + G DVN + YT LH+ +L
Sbjct: 849 TPYLSDFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNK-RDALGYTPLHYASLYDH 907
Query: 234 SEVCKLLLDAGAKPTATNSVGRTSAQMAA 320
++C LL GAKP + G+ +++
Sbjct: 908 KDICVNLLSNGAKPDVIGASGKKPIDLSS 936
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +3
Query: 168 DVNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTS 305
DVN+G E +TALH+ A G+ E+ LL AGA A N + +TS
Sbjct: 228 DVNAGIDEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTS 273
Score = 32.7 bits (71), Expect = 0.047
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 84 DENGMTALQHAAYKGNKDMVQLLLDRGADV 173
DE+G TAL AA GN +M+ LL GA+V
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANV 263
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 39.5 bits (88), Expect = 4e-04
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +3
Query: 84 DENGMTALQHAAYKGNKDMVQLLLDRGADVNSGKHEYNYTALHFGALSGSSEVCKLLLDA 263
D G T L AA G +V+ L+ + A +N+ Y +T LHF G +V L+ A
Sbjct: 138 DLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSD-SYGFTPLHFALAEGHPDVGVELVRA 196
Query: 264 GAKPTATNSVGRTSAQM 314
GA +S T+ ++
Sbjct: 197 GADTLRKDSENHTALEV 213
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 75 NFFDENGMTALQHAAYKGNKDMVQLLLDRGADVN 176
N DENG T + A G+ D++++L++RG D+N
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGGDIN 64
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 34.7 bits (76), Expect = 0.012
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 72 VNFFDENGMTALQHAAYKGNKDMVQLLLD-RGADVNSGKHEYNYTALHFGALSGSSEVCK 248
+N D G T L A + V+ LL +G DV E YTALH G+ E
Sbjct: 45 INQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAAS 104
Query: 249 LLL 257
LLL
Sbjct: 105 LLL 107
Score = 33.9 bits (74), Expect = 0.020
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 39 FSNILTQHKGXVNFF--DENGMTALQHAAYKGNKDMVQLLLDRGADVNS 179
F L QHKG F +E+G TAL A Y GN + LLL + S
Sbjct: 67 FVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAASLLLSKDPSFRS 115
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 33.5 bits (73), Expect = 0.027
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 72 VNFFDENGMTALQHAAYKGNKDMVQLLLDRGA 167
+N D+NG TAL AA GNK++V++L+ GA
Sbjct: 477 LNHQDKNGDTALNIAARIGNKNIVEVLMQAGA 508
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 201 TALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTSAQMAAFVGN 332
TAL+ A G+ + ++L+ AGA N G + A FV N
Sbjct: 486 TALNIAARIGNKNIVEVLMQAGASAYIPNRAGLSVANFGIFVEN 529
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 32.7 bits (71), Expect = 0.047
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +3
Query: 171 VNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTSAQMAAFVGNHHTVAT 350
VNS + +T+LH+ G E+ KLLL A A N + +T + N++ T
Sbjct: 240 VNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTPLMRSVIFTNNYDCQT 299
Query: 351 INNYIPRSEIEYYSI 395
+ + Y++
Sbjct: 300 FGQVLELLQSTIYAV 314
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 84 DENGMTALQHAAYKGNKDMVQLLLDRGADV 173
D++G T+L A G+ +M++LLL AD+
Sbjct: 245 DDDGHTSLHWACSMGHIEMIKLLLRANADI 274
>SPCC962.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 462 LGVNIHPVRLALN----LQHAPALLENADKASKTLXMLSKREMTR 584
LGV HP+ L ++ +H +LEN+ K ++SK E+TR
Sbjct: 222 LGVEGHPLDLVIDYHNTFEHICKILENSVKDKFIEKLVSKEELTR 266
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 186 HEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRTSAQMA 317
H + T LH+ ++++ LL GA P N G+T +++
Sbjct: 430 HLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEIS 473
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 168 DVNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGR 299
D+N + T LH + +E+ K LLD GA P + G+
Sbjct: 180 DLNEVDIKTGQTYLHVATKAKDAELVKWLLDNGADPYRRDKFGK 223
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 384 YYSIPQGLQQEPYLPPILVDPVHKFVLGVNIHPVRLALNLQHAPALLENADKASKTLXML 563
YY +P +Q LP + D HK I RL P+LL N K SK M
Sbjct: 301 YYPVPLDREQAHILPTLNTDSFHKSSF---ISSTRLC--SPENPSLLVNTAKTSK---MS 352
Query: 564 SKREMTRGSETNEVMAF 614
++RE +TN+ + F
Sbjct: 353 ARREQ---FQTNQNLPF 366
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 26.2 bits (55), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 126 GNKDM-VQLLLDRGADVNSGKHEYNYTALHFGALSGSSEVCKLLLDAGAKPTATNSVGRT 302
G+ D+ V+ L+ G + N N TALH E K+LL GA P+A + +
Sbjct: 344 GDYDLIVEELILAGFNPNEVDASSN-TALHTAVRYNRPECVKMLLKLGANPSARDFLNSW 402
Query: 303 SAQMAA 320
+ M A
Sbjct: 403 TPLMLA 408
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +3
Query: 429 PILVDPVHKFVLGVNIHPVRLALNLQHAPALLENADKASKTLXMLSKREMTRGSETNEVM 608
PIL+D ++KF N +P AL+L LLE D K + ++E+ ++ ++
Sbjct: 1898 PILIDSLYKFGAIPNPNPEIRALSLGLIKVLLEWNDLQLK----VDQKEIFSNNQKRAIL 1953
Query: 609 AFKYHYL 629
++ + ++
Sbjct: 1954 SYLFRFV 1960
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 369 RSEIEYYSIPQGLQQEPYLPPILVDPV 449
R+ + SI + L + P LPP+L +PV
Sbjct: 28 RTIVPIASIYKPLNERPDLPPVLYEPV 54
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 261 AGAKPTATNSVGRTSAQMAAFVGNHHTVATINN 359
AG K TA +S +S+ V + H V +NN
Sbjct: 845 AGVKITAKSSTSNSSSTAEYHVRSRHAVIPVNN 877
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 259 SSSSLHTSELPDRAPKCNAV*LYSCFPEFTSAPLSSSNCTIS 134
S+S L+TS P S +TS P++SSN TIS
Sbjct: 535 STSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTIS 576
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 105 LQHAAYKGNKDMVQLLLDRGADVNSGKHEYNYTA 206
L+H A+KG K+ Q L+ + N+G H YT+
Sbjct: 68 LEHLAFKGTKNRSQKALELEFE-NTGAHLNAYTS 100
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 471 NIHPVRLALNLQHAPALLENADK-ASKTL 554
N H + LN +PA LEN D ASK L
Sbjct: 190 NEHEAAILLNQADSPATLENVDAYASKLL 218
>SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 6 FAAIAQGALXEFSNILTQHKGXVNFFDENGMTA 104
FAA G L +F + HKG + G+ A
Sbjct: 89 FAAGGHGTLFDFPSATNLHKGAAKIYSMGGVIA 121
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,557
Number of Sequences: 5004
Number of extensions: 54265
Number of successful extensions: 178
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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